RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ALDH3B1P43353 468 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 MEF2DQ14814 521 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 KISS1Q15726 138 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 UBE2V2Q15819 145 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 FAM189A2Q15884 450 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 ZNF774Q6NX45 483 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 CRIP3Q6Q6R5 217 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 PNLDC1Q8NA58 520 aaKnown RBP17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 PIPOXQ9P0Z9 390 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 GHRLQ9UBU3 117 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 PIGLQ9Y2B2 252 aa17.25■□□□□ 0.35
PCDHB11-202ENST00000624887 OR6C6A6NF89 314 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 OR2A4O95047 310 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 ZNF32P17041 273 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 CLDN18P56856 261 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 KRTAP27-1Q3LI81 207 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 BPIFB2Q8N4F0 458 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 IL22RA1Q8N6P7 574 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 OR4S1Q8NGB4 309 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 NUDCD2Q8WVJ2 157 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 SGK3Q96BR1 496 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 OR2A7Q96R45 310 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 TMEM59Q9BXS4 323 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 MAGEA5P43359 124 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 SIGIRRQ6IA17 410 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 ZNF767PQ75MW2 155 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 SLC6A7Q99884 636 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 CHST6Q9GZX3 395 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 SLC2A8Q9NY64 477 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 TIMM10BQ9Y5J6 103 aa17.24■□□□□ 0.35
PCDHB11-202ENST00000624887 MED13Q9UHV7 2174 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 OTOGLQ3ZCN5 2332 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 DHRS7CA6NNS2 312 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 FAM166BA8MTA8 275 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 DISC1C4P0D8 188 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 GSTP1P09211 210 aaKnown RBP17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 NAT2P11245 290 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 MPZP25189 248 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 PTGFRP43088 359 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 PCBD1P61457 104 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 SFRP5Q5T4F7 317 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 MUC20Q8N307 709 aaPredicted RBP17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 GVQW1Q8N7I0 195 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 CCDC107Q8WV48 283 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 CHIAQ9BZP6 476 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 POFUT1Q9H488 388 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 BANF2Q9H503 90 aa17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 MYOZ1Q9NP98 299 aaPredicted RBP17.23■□□□□ 0.35
PCDHB11-202ENST00000624887 TMEM82A0PJX8 343 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 OR14I1A6ND48 311 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 SSX5O60225 188 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 CRTAPO75718 401 aaPredicted RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 ZNF708P17019 499 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 RAP2BP61225 183 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 PSG4Q00888 419 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 HGFACQ04756 655 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 SRYQ05066 204 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 RNASE10Q5GAN6 216 aaKnown RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 SLC16A14Q7RTX9 510 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 TMEM251Q8N6I4 163 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 RAB3CQ96E17 227 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 RADILQ96JH8 1075 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 URM1Q9BTM9 101 aaKnown RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 IFT46Q9NQC8 304 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 SLC23A1Q9UHI7 598 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 KCNK7Q9Y2U2 307 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 NOSIPQ9Y314 301 aaKnown RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 A0A1W2PP11 408 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 SOCS1O15524 211 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 PATE4P0C8F1 98 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 HIST1H1DP16402 221 aaKnown RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 RSPO4Q2I0M5 234 aaPredicted RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 LGALSLQ3ZCW2 172 aaPredicted RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 NRN1LQ496H8 165 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 DMRTC1Q5HYR2 192 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 PLAC9Q5JTB6 97 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 RTN4RL2Q86UN3 420 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 FAM109AQ8N4B1 249 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 MDS2Q8NDY4 140 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 SEMA6DQ8NFY4 1073 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 OR56B1Q8NGI3 324 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 OR13C8Q8NGS7 320 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 AKR7LQ8NHP1 331 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 NPRL2Q8WTW4 380 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 HAS2Q92819 552 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 PRRT1Q99946 306 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 OR2H1Q9GZK4 316 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 CST11Q9H112 138 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 IRF2BPLQ9H1B7 796 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 WNT5BQ9H1J7 359 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 SLC6A15Q9H2J7 730 aa17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 KLF13Q9Y2Y9 288 aaPredicted RBP17.22■□□□□ 0.35
PCDHB11-202ENST00000624887 CDK2AP1O14519 115 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 MRPL33O75394 65 aaKnown RBP17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 TOXO94900 526 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 CRYZL1O95825 349 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 TPOP07202 933 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 SP1P08047 785 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 FTH1P19P0C7X4 201 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms