RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 RNPEPL1Q9HAU8 725 aa13.29□□□□□ -0.28
DDB2-216ENST00000622878 TRIM36Q9NQ86 728 aa13.29□□□□□ -0.28
DDB2-216ENST00000622878 LRP12Q9Y561 859 aa13.29□□□□□ -0.28
DDB2-216ENST00000622878 PKD1L1Q8TDX9 2849 aa13.29□□□□□ -0.28
DDB2-216ENST00000622878 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 PRR32B1ATL7 298 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.28□□□□□ -0.28
DDB2-216ENST00000622878 NDUFA2O43678 99 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 PRKYO43930 277 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 MITFO75030 526 aaPredicted RBP13.28□□□□□ -0.28
DDB2-216ENST00000622878 EPHA2P29317 976 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 CFHR2P36980 270 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 RPS7P62081 194 aaKnown RBP13.28□□□□□ -0.28
DDB2-216ENST00000622878 GFOD2Q3B7J2 385 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 DEGS2Q6QHC5 323 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 WDR82Q6UXN9 313 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 GALNT4Q8N4A0 578 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 OR8B12Q8NGG6 310 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 OR8S1Q8NH09 359 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 C1orf147Q96MC9 270 aaPredicted RBP13.28□□□□□ -0.28
DDB2-216ENST00000622878 GABARAPL1Q9H0R8 117 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 NIPAL2Q9H841 368 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 SMURF1Q9HCE7 757 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 KIF17Q9P2E2 1029 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 LAMP5Q9UJQ1 280 aa13.28□□□□□ -0.28
DDB2-216ENST00000622878 A6NLC8 198 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 ATP5HO75947 161 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 CST4P01036 141 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 RASSF2P50749 326 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 CSNK2BP67870 215 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 ROM1Q03395 351 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 FAM76BQ5HYJ3 339 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 SLX4IPQ5VYV7 408 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 KDM4DQ6B0I6 523 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 FGF23Q9GZV9 251 aaPredicted RBP13.27□□□□□ -0.29
DDB2-216ENST00000622878 MMADHCQ9H3L0 296 aaPredicted RBP13.27□□□□□ -0.29
DDB2-216ENST00000622878 FAM206AQ9NX38 181 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 ERVK-18Q9QC07 812 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 KAAG1Q9UBP8 84 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 ZNF391Q9UJN7 358 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 MPC1Q9Y5U8 109 aa13.27□□□□□ -0.29
DDB2-216ENST00000622878 SOX21Q9Y651 276 aaPredicted RBP13.27□□□□□ -0.29
DDB2-216ENST00000622878 TRRAPQ9Y4A5 3859 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 A0A0U1RQV5 110 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 hCG_1807616A0A1W2PRN6 198 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 ACOD1A6NK06 481 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 ZAR1LA6NP61 321 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 G3V2T6 193 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 ADAM20O43506 726 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 ENSAO43768 121 aaKnown RBP13.26□□□□□ -0.29
DDB2-216ENST00000622878 IGLV3-1P01715 115 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 GYPAP02724 150 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 CFPP27918 469 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 DCTDP32321 178 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 FGF12P61328 243 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 ACTG1P63261 375 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 IL5RAQ01344 420 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 SNCBQ16143 134 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 AADACL4Q5VUY2 407 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 CD276Q5ZPR3 534 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 C12orf73Q69YU5 71 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 C12orf54Q6X4T0 127 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 BCDIN3DQ7Z5W3 292 aaKnown RBP13.26□□□□□ -0.29
DDB2-216ENST00000622878 KRT77Q7Z794 578 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 FTMTQ8N4E7 242 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 LRRC29Q8WV35 223 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 OR5P3Q8WZ94 311 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 TECTBQ96PL2 329 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 PAPOLGQ9BWT3 736 aaKnown RBP13.26□□□□□ -0.29
DDB2-216ENST00000622878 RASSF4Q9H2L5 321 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 KRT84Q9NSB2 600 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 COPS3Q9UNS2 423 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 AP4S1Q9Y587 144 aa13.26□□□□□ -0.29
DDB2-216ENST00000622878 IGHV3OR15-7A0A075B7D8 119 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 IGHV3OR16-10A0A075B7F0 116 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 TRAV40A0A0B4J280 105 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 DNAJC9-AS1A6NH13 148 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 ZNF850A8MQ14 1090 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 M0R129 80 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 HAX1O00165 279 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 PSMD9O00233 223 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 CDIPTO14735 213 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 MRPL3P09001 348 aaKnown RBP13.25□□□□□ -0.29
DDB2-216ENST00000622878 MMP9P14780 707 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 MUC1P15941 1255 aaPredicted RBP13.25□□□□□ -0.29
DDB2-216ENST00000622878 PRTN3P24158 256 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 FASP25445 335 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 GNALP38405 381 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 ELF3P78545 371 aaPredicted RBP13.25□□□□□ -0.29
DDB2-216ENST00000622878 POU4F2Q12837 409 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 PRDX4Q13162 271 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 LCN1P1Q5VSP4 162 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 KCTD18Q6PI47 426 aaPredicted RBP13.25□□□□□ -0.29
DDB2-216ENST00000622878 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
DDB2-216ENST00000622878 MEPCEQ7L2J0 689 aaKnown RBP13.25□□□□□ -0.29
DDB2-216ENST00000622878 HPSE2Q8WWQ2 592 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 GCDHQ92947 438 aaPredicted RBP13.25□□□□□ -0.29
DDB2-216ENST00000622878 OR8B4Q96RC9 309 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 MICU1Q9BPX6 476 aa13.25□□□□□ -0.29
DDB2-216ENST00000622878 MS4A7Q9GZW8 240 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms