RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 LAMA2P24043 3122 aaKnown RBP8.46□□□□□ -1.05
IGHV3-54-201ENST00000622166 C5orf51A6NDU8 294 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 MPTX1A8MV57 137 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 NUDT19A8MXV4 375 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 EEF1E1-BLOC1S5C9J1V9 151 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 TEX46H3BTG2 121 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 EIF1BO60739 113 aaKnown RBP8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 VAMP5O95183 116 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 APOC1P02654 83 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 OPN1LWP04000 364 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SLC2A1P11166 492 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 MSR1P21757 451 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 ANOS1P23352 680 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 VAMP1P23763 118 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 OTX1P32242 354 aaPredicted RBP8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SLC6A9P48067 706 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 CSNK1A1P48729 337 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 CLDN17P56750 224 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 TAS2R46P59540 309 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SURF2Q15527 256 aaPredicted RBP8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 STK11Q15831 433 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SGCAQ16586 387 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 FAM74A1Q5RGS3 127 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 RTL6Q6ICC9 239 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 FAM122CQ6P4D5 195 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 OPN5Q6U736 354 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 Q7L0L9 218 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 KCTD9Q7L273 389 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SLC16A14Q7RTX9 510 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 COMMD2Q86X83 199 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 PPP1R3BQ86XI6 285 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 PNLDC1Q8NA58 520 aaKnown RBP8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SLC30A7Q8NEW0 376 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 GJC3Q8NFK1 279 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 OR5AP2Q8NGF4 316 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 OR52H1Q8NGJ2 320 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 OR5H2Q8NGV7 314 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 OR13G1Q8NGZ3 307 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SAP25Q8TEE9 199 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 PP6455Q8WZ26 134 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 MARC2Q969Z3 335 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 PIK3IP1Q96FE7 263 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 PGAM5Q96HS1 289 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 ARHGAP5-AS1Q96IT6 56 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 ZNF75AQ96N20 296 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 SPACA5Q96QH8 159 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 RTBDNQ9BSG5 229 aaPredicted RBP8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 NAA11Q9BSU3 229 aaPredicted RBP8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 ZNF416Q9BWM5 594 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 PECRQ9BY49 303 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 MS4A7Q9GZW8 240 aaPredicted RBP8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 ZNF700Q9H0M5 742 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 BANF2Q9H503 90 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 C5orf66Q9H5L9 145 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 C12orf4Q9NQ89 552 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 CYTL1Q9NRR1 136 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 TMEM100Q9NV29 134 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 CSAG2Q9Y5P2 127 aa8.46□□□□□ -1.06
IGHV3-54-201ENST00000622166 LOC100509620A0A075B734 347 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 C5orf63A6NC05 138 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 FIGNL2A6NMB9 653 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 FAM25EA8MYX2 175 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 E9PLN8 166 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 F5H0A9 414 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 H0YIZ8 118 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 DNASE2O00115 360 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 SMAD9O15198 467 aaKnown RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 RRP8O43159 456 aaKnown RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 SIGLEC6O43699 453 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 CRTAPO75718 401 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 CD79AP11912 226 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 TPT1P13693 172 aaKnown RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 AMY2BP19961 511 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 KLK2P20151 261 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 SFTPDP35247 375 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 PTGFRP43088 359 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 ZNF84P51523 738 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 IL15RAQ13261 267 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 ARFRP1Q13795 201 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 ATXN7L3Q14CW9 347 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 KISS1Q15726 138 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 RSPO1Q2MKA7 263 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 GFOD2Q3B7J2 385 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 LRRC37A5PQ49AS3 106 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 PHYHD1Q5SRE7 291 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 PRSS54Q6PEW0 395 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 CLEC18BQ6UXF7 455 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 TMEM123Q8N131 208 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 BPIFCQ8NFQ6 507 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 OR51T1Q8NGJ9 327 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 M1APQ8TC57 530 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 NAT6Q93015 286 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 NABP1Q96AH0 204 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 ZC3H10Q96K80 434 aaKnown RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 IMMP1LQ96LU5 166 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 NECAB3Q96P71 396 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 GPER1Q99527 375 aa8.45□□□□□ -1.06
IGHV3-54-201ENST00000622166 NELFAQ9H3P2 528 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms