RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 C14orf79Q96F83 325 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 NMES1Q9C002 83 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 CLEC1BQ9P126 229 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 LSM5Q9Y4Y9 91 aaKnown RBP13.94□□□□□ -0.18
NPHP4-211ENST00000622020 PCDHGA1Q9Y5H4 931 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 RHPN2P1A8MT19 583 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 TMEM14DPA8MWL7 114 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 ZNF878C9JN71 531 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 E9PLN8 166 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 RNASEK-C17orf49H0YIS7 233 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 CX3CR1P49238 355 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 FAM69BQ5VUD6 431 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 OR8B12Q8NGG6 310 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 SECTM1Q8WVN6 248 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 PTX4Q96A99 478 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 TMEM100Q9NV29 134 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 RALGAPA1Q6GYQ0 2036 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 TO15178 435 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 RAMP1O60894 148 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 APOC1P02654 83 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 PTGFRP43088 359 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 DAP3P51398 398 aaKnown RBP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 F2RL1P55085 397 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 CLRN1P58418 232 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 MRPS21P82921 87 aaKnown RBP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 FAM76BQ5HYJ3 339 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 ZNF283Q8N7M2 679 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 DTWD2Q8NBA8 298 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 OR2AJ1Q8NGZ0 328 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 CLCC1Q96S66 551 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 CDC6Q99741 560 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 SULT4A1Q9BR01 284 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 HDHD3Q9BSH5 251 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 SERINC1Q9NRX5 453 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 RCC2Q9P258 522 aaKnown RBP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 ZNF107Q9UII5 783 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 LHFPL6Q9Y693 200 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 LRP4O75096 1905 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 A0A1W2PPC4 97 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 EFNA2O43921 213 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 CYCSP99999 105 aaKnown RBP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 OR5AS1Q8N127 324 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 SFT2D1Q8WV19 159 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 RPS10P5Q9NQ39 176 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 KLRF1Q9NZS2 232 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 A6NIZ1 184 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 EIF3GO75821 320 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 H2AFB1P0C5Y9 115 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 OR8U9P0C7N5 309 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 BLVRBP30043 206 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 SLC6A9P48067 706 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 RAP1BP61224 184 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 RAP1AP62834 184 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 SP6Q3SY56 376 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 FAHD2BQ6P2I3 314 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-211ENST00000622020 PRSS54Q6PEW0 395 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 OR8U1Q8NH10 309 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 FAHD2AQ96GK7 314 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 CHST11Q9NPF2 352 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 SLC2A4RGQ9NR83 387 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 MMP17Q9ULZ9 603 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 MMACHCQ9Y4U1 282 aa13.93□□□□□ -0.18
NPHP4-211ENST00000622020 IGKV1D-8A0A087WSZ0 117 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 F5H5K5 113 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 ZNF806P0C7X5 589 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 CD37P11049 281 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 FHITP49789 147 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 RNF4P78317 190 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 IAH1Q2TAA2 248 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-211ENST00000622020 AADACL3Q5VUY0 350 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 ZNF285Q96NJ3 590 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 SEC11CQ9BY50 192 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 PLA2G2EQ9NZK7 142 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 DMDP11532 3685 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 ZNF814B7Z6K7 855 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 SNRNP70P08621 437 aaKnown RBP13.92□□□□□ -0.18
NPHP4-211ENST00000622020 CPT2P23786 658 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 GABRR1P24046 479 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 FASLGP48023 281 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 P2RY4P51582 365 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 TAS2R31P59538 309 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 DHRS11Q6UWP2 260 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 Q6ZRG5 221 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 TMEM234Q8WY98 164 aa13.92□□□□□ -0.18
NPHP4-211ENST00000622020 CARHSP1Q9Y2V2 147 aaKnown RBP13.92□□□□□ -0.18
NPHP4-211ENST00000622020 A0A1W2PQD3 144 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 STMND1H3BQB6 276 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 SGCEO43556 437 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 ZNF17P17021 662 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 LAP3P28838 519 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 GALNSP34059 522 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 DCDP81605 110 aaKnown RBP13.91□□□□□ -0.18
NPHP4-211ENST00000622020 CHAF1BQ13112 559 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 MYBPHQ13203 477 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 BRICD5Q6PL45 260 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 PIGTQ969N2 578 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 C1orf147Q96MC9 270 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-211ENST00000622020 SLC5A7Q9GZV3 580 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 SLC26A1Q9H2B4 701 aa13.91□□□□□ -0.18
NPHP4-211ENST00000622020 FER1L5A0AVI2 2057 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms