RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SERPINA5P05154 406 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 CRHP06850 196 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 PTHLHP12272 177 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 COX5AP20674 150 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 HOXC12P31275 282 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 GDNFP39905 211 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 TNK1Q13470 666 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 TSC22D1Q15714 1073 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 KISS1Q15726 138 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 CELF2-AS1Q8N7Q2 184 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 ZNF610Q8N9Z0 462 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 SLC30A7Q8NEW0 376 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 SSC4DQ8WTU2 575 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 STARD4Q96DR4 205 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 OPN3Q9H1Y3 402 aaPredicted RBP18.59■□□□□ 0.57
SPAST-204ENST00000621856 NEK6Q9HC98 313 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 CACNG2Q9Y698 323 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 FAM240BA0A1B0GVZ2 78 aa18.58■□□□□ 0.57
SPAST-204ENST00000621856 METTL21EPA6NDL7 271 aa18.58■□□□□ 0.57
SPAST-204ENST00000621856 VSIG8P0DPA2 414 aa18.58■□□□□ 0.57
SPAST-204ENST00000621856 ID4P47928 161 aa18.58■□□□□ 0.57
SPAST-204ENST00000621856 CNN3Q15417 329 aaKnown RBP18.58■□□□□ 0.57
SPAST-204ENST00000621856 OR8B8Q15620 311 aa18.58■□□□□ 0.57
SPAST-204ENST00000621856 EIF2S3LQ2VIR3 472 aaKnown RBP18.58■□□□□ 0.57
SPAST-204ENST00000621856 CLVS2Q5SYC1 327 aa18.58■□□□□ 0.57
SPAST-204ENST00000621856 MRPL21Q7Z2W9 205 aaKnown RBP18.58■□□□□ 0.57
SPAST-204ENST00000621856 SNRNP27Q8WVK2 155 aaKnown RBP18.58■□□□□ 0.57
SPAST-204ENST00000621856 FAM46BQ96A09 425 aa18.58■□□□□ 0.57
SPAST-204ENST00000621856 PTTG3PQ9NZH4 202 aa18.58■□□□□ 0.57
SPAST-204ENST00000621856 PRRC2CQ9Y520 2896 aaKnown RBP18.58■□□□□ 0.56
SPAST-204ENST00000621856 GMDSO60547 372 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 TOXO94900 526 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 KIR2DL3P43628 341 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 TDGF1P3P51864 188 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 GPR176Q14439 515 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 TBC1D28Q2M2D7 210 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 C3P1Q6ZMU1 363 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 GABRG1Q8N1C3 465 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 RPRMLQ8N4K4 120 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 C1orf162Q8NEQ5 155 aaPredicted RBP18.57■□□□□ 0.56
SPAST-204ENST00000621856 SPSB1Q96BD6 273 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 MMP28Q9H239 520 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 PTPRQQ9UMZ3 2332 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 CENPXA8MT69 81 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 ORC5O43913 435 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 NRASP01111 189 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 CGAP01215 116 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 HOXD4P09016 255 aaPredicted RBP18.57■□□□□ 0.56
SPAST-204ENST00000621856 UBBP0CG47 229 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 HOXB1P14653 301 aaPredicted RBP18.57■□□□□ 0.56
SPAST-204ENST00000621856 PRKACBP22694 351 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 QRFPP83859 136 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 UNC119Q13432 240 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 OR2W3Q7Z3T1 314 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 PAQR4Q8N4S7 273 aaPredicted RBP18.57■□□□□ 0.56
SPAST-204ENST00000621856 OR5D18Q8NGL1 313 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 ITFG2Q969R8 447 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 ZC3HAV1LQ96H79 300 aaKnown RBP18.57■□□□□ 0.56
SPAST-204ENST00000621856 ZNF75AQ96N20 296 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 STARD10Q9Y365 291 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 SPTBN4Q9H254 2564 aa18.57■□□□□ 0.56
SPAST-204ENST00000621856 A0A0A6YYH2 397 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 ZNF816-ZNF321PA0A0X1KG74 233 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 A6NJ64 397 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 TMEM14DPA8MWL7 114 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 IDH3GP51553 393 aaPredicted RBP18.56■□□□□ 0.56
SPAST-204ENST00000621856 GK2Q14410 553 aaPredicted RBP18.56■□□□□ 0.56
SPAST-204ENST00000621856 LINC00303Q3SY05 128 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 CXorf67Q86X51 503 aaPredicted RBP18.56■□□□□ 0.56
SPAST-204ENST00000621856 ACBD4Q8NC06 268 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 TNFAIP8L1Q8WVP5 186 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 PIGCQ92535 297 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 FBLN5Q9UBX5 448 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 KCNN3Q9UGI6 736 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 ING4Q9UNL4 249 aa18.56■□□□□ 0.56
SPAST-204ENST00000621856 INTS1Q8N201 2190 aaKnown RBP18.56■□□□□ 0.56
SPAST-204ENST00000621856 FAM230AA0A1W2PPH8 454 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 PRRG2O14669 202 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 NGFP01138 241 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 ZNF14P17017 642 aaPredicted RBP18.55■□□□□ 0.56
SPAST-204ENST00000621856 TIMP3P35625 211 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 PTGFRP43088 359 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 ZBTB37Q5TC79 503 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 TMEM42Q69YG0 159 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 GFRALQ6UXV0 394 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 BEND4Q6ZU67 534 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 MOB3CQ70IA8 216 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 CADM3Q8N126 398 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 NAXEQ8NCW5 288 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 CPNE2Q96FN4 548 aaPredicted RBP18.55■□□□□ 0.56
SPAST-204ENST00000621856 S100A13Q99584 98 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 REPIN1Q9BWE0 567 aaKnown RBP18.55■□□□□ 0.56
SPAST-204ENST00000621856 OR51B6Q9H340 312 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 CDH20Q9HBT6 801 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 MRPL15Q9P015 296 aaKnown RBP18.55■□□□□ 0.56
SPAST-204ENST00000621856 MYO7BQ6PIF6 2116 aa18.55■□□□□ 0.56
SPAST-204ENST00000621856 MEIOCA2RUB1 952 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 MPIG6BO95866 241 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 ECDO95905 644 aaPredicted RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 CELA3BP08861 270 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms