RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 TAB1Q15750 504 aa16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 TBC1D28Q2M2D7 210 aa16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 HES5Q5TA89 166 aa16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 OR13C9Q8NGT0 318 aa16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 ENKURQ8TC29 256 aa16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 C11orf54Q9H0W9 315 aaPredicted RBP16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 SLITRK2Q9H156 845 aa16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 RBFOX1Q9NWB1 397 aaKnown RBP16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 ZNF221Q9UK13 617 aa16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 PIGLQ9Y2B2 252 aa16.07■□□□□ 0.16
SEMA6C-210ENST00000621728 IGHV1-18A0A0C4DH31 117 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 MEIOCA2RUB1 952 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 PAHP00439 452 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 FAM157BP0CG42 384 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 FSTP19883 344 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 MAP2K3P46734 347 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 ZNF83P51522 516 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 SPATA46Q5T0L3 261 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 RNF144BQ7Z419 303 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 THRSPQ92748 146 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 CCDC120Q96HB5 630 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 CMTM3Q96MX0 182 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 ZCCHC4Q9H5U6 513 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 PLEKHA1Q9HB21 404 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 AMDHD2Q9Y303 409 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 hCG_38984A0A1B0GV85 526 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 FAM90A27PA6NNH2 459 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 NOTOA8MTQ0 251 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 FAM25AB3EWG3 89 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 FAM25CB3EWG5 89 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 FAM25GB3EWG6 89 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 PLA2G10O15496 165 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 SSX4O60224 188 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 ATP6V1G1O75348 118 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 GNLYP22749 145 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 CLDN12P56749 244 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 FAM3AP98173 230 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 KCNJ8Q15842 424 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 TIMM23BQ5SRD1 257 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 OR6F1Q8NGZ6 308 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 PRR7Q8TB68 274 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 APOBEC3DQ96AK3 386 aaPredicted RBP16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 NEDD4LQ96PU5 975 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 CDH20Q9HBT6 801 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 ABRACLQ9P1F3 81 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 CKLFQ9UBR5 152 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 FOXJ3Q9UPW0 622 aa16.06■□□□□ 0.16
SEMA6C-210ENST00000621728 ADGRG4Q8IZF6 3080 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 ANXA2P2A6NMY6 339 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 PDCD5O14737 125 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 IGLV1-44P01699 117 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 HLA-DMAP28067 261 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 GSK3AP49840 483 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 ERVS71-1P61550 626 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 TLE1Q04724 770 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 GK2Q14410 553 aaPredicted RBP16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 RSBN1Q5VWQ0 802 aaPredicted RBP16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 BAIAP2L2Q6UXY1 529 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 Q6ZSR3 168 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 SERPINA12Q8IW75 414 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 OBP2BQ9NPH6 170 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 CRIM1Q9NZV1 1036 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 CGGBP1Q9UFW8 167 aaPredicted RBP16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 V9GY05 133 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 ESPL1Q14674 2120 aa16.05■□□□□ 0.16
SEMA6C-210ENST00000621728 XRCC2O43543 280 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 SNRPBP14678 240 aaKnown RBP16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 INPP1P49441 399 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 PPA1Q15181 289 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 PLET1Q6UQ28 207 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 STEAP2Q8NFT2 490 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 OR1M1Q8NGA1 313 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 SPSB4Q96A44 273 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 SPACA5Q96QH8 159 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 ELOVL5Q9NYP7 299 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 NKX2-6A6NCS4 301 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 C16orf97H3BN30 126 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 M0R1B8 84 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 SMPD2O60906 423 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 CALCRP30988 508 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 NR4A2P43354 598 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 MADCAM1Q13477 382 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 SNTB1Q13884 538 aaKnown RBP16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 SEZ6L2Q6UXD5 910 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 OR5AS1Q8N127 324 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 SEMA6DQ8NFY4 1073 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 OR5H6Q8NGV6 325 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 NPRL2Q8WTW4 380 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 EXTL2Q9UBQ6 330 aa16.04■□□□□ 0.16
SEMA6C-210ENST00000621728 IGKV1-9A0A0C4DH69 117 aa16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 IFITM5A6NNB3 132 aa16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 MTRF1O75570 445 aaKnown RBP16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 ELK1P19419 428 aa16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 PYHIN1Q6K0P9 492 aa16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 ZNF529Q6P280 563 aa16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 OR52N4Q8NGI2 321 aa16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 OR5D14Q8NGL3 314 aa16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 AKAP1Q92667 903 aaKnown RBP eCLIP16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 DIDO1Q9BTC0 2240 aaKnown RBP16.03■□□□□ 0.16
SEMA6C-210ENST00000621728 LYRM1O43325 122 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms