RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 APOBEC1P41238 236 aaKnown RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 FAM189BP81408 668 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 MRPS21P82921 87 aaKnown RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 MFSD12Q6NUT3 480 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 GPR32P1Q8NGA4 272 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM204Q9BSN7 226 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ADGRL4Q9HBW9 690 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 IL17CQ9P0M4 197 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 WRAP73Q9P2S5 460 aaPredicted RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 LPAR3Q9UBY5 353 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 AMDHD2Q9Y303 409 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 AQP7P3A6NL99 342 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 P2RY10O00398 339 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ACOT8O14734 319 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 KCNAB3O43448 404 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 LMX1BO60663 402 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 KLF7O75840 302 aaPredicted RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 CRHP06850 196 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 IL9P15248 144 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 CLDN2P57739 230 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 CFHR1Q03591 330 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OR2A2Q6IF42 318 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 HMGN2P46Q86SG4 172 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 LMO3Q8TAP4 145 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 GALMQ96C23 342 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF391Q9UJN7 358 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 MEIKINA0A087WXM9 373 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TRBV11-1A0A0K0K1C0 115 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 G3V3Y1 287 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 C1orf105O95561 183 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 EPXP11678 715 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ARSDP51689 593 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 HLA-DRB3P79483 266 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 RIGQ13278 110 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 PMCHL1Q16048 86 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM178AQ8NBL3 297 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SCCPDHQ8NBX0 429 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 GMPPAQ96IJ6 420 aaPredicted RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SLC25A33Q9BSK2 321 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OCIAD1Q9NX40 245 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 STRCQ7RTU9 1775 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 NRXN3Q9Y4C0 1643 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 COL2A1P02458 1487 aaPredicted RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SLC5A10A0PJK1 596 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SELENOFO60613 162 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OPN1LWP04000 364 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 PSMG4Q5JS54 123 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 PARM1Q6UWI2 310 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 CPEB2Q7Z5Q1 589 aaKnown RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 CAMKMTQ7Z624 323 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 MYPOPQ86VE0 399 aaPredicted RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OR4F17Q8NGA8 305 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM37Q8WXS4 190 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 STARD4Q96DR4 205 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 WDFY2Q96P53 400 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 IL17FQ96PD4 163 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ADOQ96SZ5 270 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TMPRSS13Q9BYE2 586 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM231Q9H6L2 316 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 IL21Q9HBE4 155 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 DNAJC13O75165 2243 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 CORTO00230 105 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ISLRO14498 428 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 MBTPS2O43462 519 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 AOAHP28039 575 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 DLX1P56177 255 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 RPL27P61353 136 aaKnown RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SEZ6L2Q6UXD5 910 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OR2W3Q7Z3T1 314 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 GDF7Q7Z4P5 450 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 YIPF6Q96EC8 236 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM56Q96MV1 263 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 NARFLQ9H6Q4 476 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 UQCC1Q9NVA1 299 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 MIOXQ9UGB7 285 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SLCO3A1Q9UIG8 710 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SLC17A4Q9Y2C5 497 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF835Q9Y2P0 537 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SMAD6O43541 496 aaKnown RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CD1CP29017 333 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 FAM3BP58499 235 aaPredicted RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 FAM3AP98173 230 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CD226Q15762 336 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 H1FNTQ75WM6 255 aaPredicted RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 Q8IYB0 196 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 KLHDC9Q8NEP7 349 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 OR4B1Q8NGF8 309 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 OR5A2Q8NGI9 324 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 ERGIC1Q969X5 290 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CMC2Q9NRP2 79 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 C5P01031 1676 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CACNA1SQ13698 1873 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 TPRP12270 2363 aaKnown RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 GAGE10A6NGK3 116 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 PDE6DO43924 150 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 F7P08709 466 aaPredicted RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 FURINP09958 794 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 PTGFRP43088 359 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 PIGPP57054 158 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CLDN10P78369 228 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms