RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 FAM96BQ9Y3D0 163 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 N6AMT1Q9Y5N5 214 aa9.87□□□□□ -0.83
UPF3B-204ENST00000619445 NOTCH1P46531 2555 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 hCG_38984A0A1B0GV85 526 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 CLPSL1A2RUU4 121 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 BTBD17A6NE02 478 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 B2RBV5 119 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 H3BN98 237 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 TIMM23O14925 209 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 NDUFB3O43676 98 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 GLCEO94923 617 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 SOX14O95416 240 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 GYPBP06028 91 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 H2BFMP0C1H6 154 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 RAP2AP10114 183 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 SLC2A1P11166 492 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 ATP6V1B2P21281 511 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 EEF1B2P24534 225 aaKnown RBP9.86□□□□□ -0.83
UPF3B-204ENST00000619445 GSK3AP49840 483 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 GNGT1P63211 74 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 LRRC10Q5BKY1 277 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 ATPAF1Q5TC12 328 aaPredicted RBP9.86□□□□□ -0.83
UPF3B-204ENST00000619445 LINC01590Q5TEZ4 76 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 GDPGP1Q6ZNW5 385 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 ZNF826PQ6ZT77 177 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 ERI1Q8IV48 349 aaKnown RBP9.86□□□□□ -0.83
UPF3B-204ENST00000619445 OR1M1Q8NGA1 313 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 OR10G2Q8NGC3 310 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 OR10Z1Q8NGY1 313 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 OR4Q3Q8NH05 313 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 LRRC29Q8WV35 223 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 ZNRF4Q8WWF5 429 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 WFDC12Q8WWY7 111 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 ST8SIA4Q92187 359 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 SGK3Q96BR1 496 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 PGAM5Q96HS1 289 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 ABHD6Q9BV23 337 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 PAPOLGQ9BWT3 736 aaKnown RBP9.86□□□□□ -0.83
UPF3B-204ENST00000619445 CHIAQ9BZP6 476 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 TLNRD1Q9H1K6 362 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 SMURF1Q9HCE7 757 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 ARMC1Q9NVT9 282 aa9.86□□□□□ -0.83
UPF3B-204ENST00000619445 MDFIC2A0A1B0GVS7 189 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 TCRBV5S2A0A599 114 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 NKX6-3A6NJ46 265 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 M0QZ24 198 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 PRODHO43272 600 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 HMGN1P05114 100 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 LYNP07948 512 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 FBP1P09467 338 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 CALB2P22676 271 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 OPRL1P41146 370 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 ZNF121P58317 390 aaPredicted RBP9.85□□□□□ -0.83
UPF3B-204ENST00000619445 ARF6P62330 175 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 DBPQ10586 325 aaPredicted RBP9.85□□□□□ -0.83
UPF3B-204ENST00000619445 LYPD4Q6UWN0 246 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 WDR82Q6UXN9 313 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 C1orf122Q6ZSJ8 110 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 FAM57BQ71RH2 274 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 LY6G5BQ8NDX9 201 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 GIPC3Q8TF64 312 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 LHX4Q969G2 390 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 ASB9Q96DX5 294 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 MED30Q96HR3 178 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 NSL1Q96IY1 281 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 HIST1H2AAQ96QV6 131 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 ZNF556Q9HAH1 456 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 C1RLQ9NZP8 487 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 DNAJB11Q9UBS4 358 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 U3KQV3 271 aa9.85□□□□□ -0.83
UPF3B-204ENST00000619445 ACOD1A6NK06 481 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 PRR23D1E9PI22 279 aaPredicted RBP9.84□□□□□ -0.83
UPF3B-204ENST00000619445 CST4P01036 141 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 PRR23D2P0DMB1 279 aaPredicted RBP9.84□□□□□ -0.83
UPF3B-204ENST00000619445 ATP6V1B1P15313 513 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 OMGP23515 440 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 WDR38Q5JTN6 314 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 SLC35D3Q5M8T2 416 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 RUSC1-AS1Q66K80 236 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 BRICD5Q6PL45 260 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 PRSS45Q7RTY3 260 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 TIGD4Q8IY51 512 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 OTOSQ8NHW6 89 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 C8orf46Q8TAG6 207 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 OTULINQ96BN8 352 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 ITPKCQ96DU7 683 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 FEVQ99581 238 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 YY1AP1Q9H869 796 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 HAO2Q9NYQ3 351 aa9.84□□□□□ -0.83
UPF3B-204ENST00000619445 SOX21Q9Y651 276 aaPredicted RBP9.84□□□□□ -0.83
UPF3B-204ENST00000619445 C5orf63A6NC05 138 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 GNGT2O14610 69 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 GPR137BO60478 399 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 CST1P01037 141 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 CLUP10909 449 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 PSKH1P11801 424 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 IER3P46695 156 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 BLMHQ13867 455 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 GFOD2Q3B7J2 385 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 FAM76BQ5HYJ3 339 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms