RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 LGALS12Q96DT0 336 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 RNFT2Q96EX2 444 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 TIMD4Q96H15 378 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 Q96MT0 163 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 ADAT1Q9BUB4 502 aaKnown RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 JAM3Q9BX67 310 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 FGF23Q9GZV9 251 aaPredicted RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 PPP1R3EQ9H7J1 279 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 DCLRE1BQ9H816 532 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 TMEM165Q9HC07 324 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 ABCB9Q9NP78 766 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 AASSQ9UDR5 926 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 RHBDD3Q9Y3P4 386 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 MPC1Q9Y5U8 109 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 SNX5Q9Y5X3 404 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 V9GYS6 101 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 MALRD1Q5VYJ5 2156 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 JMJD1CQ15652 2540 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 FBN1P35555 2871 aaKnown RBP6.92□□□□□ -1.3
NEK3-209ENST00000618856 PPIAL4EA0A075B759 164 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 PPIAL4CA0A0B4J2A2 164 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 SNTNA6NMZ2 147 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 ANKRD30BLA7E2S9 258 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 A8MXK9 166 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 PPIAL4DF5H284 164 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 LMX1BO60663 402 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 FAM20BO75063 409 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 DHRS3O75911 302 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 APOL3O95236 402 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 TGFAP01135 160 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 KRT8P05787 483 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 MSMBP08118 114 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 PPIAL4FP0DN26 164 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 THBS2P35442 1172 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 PSMB10P40306 273 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 MDH2P40926 338 aaKnown RBP6.92□□□□□ -1.3
NEK3-209ENST00000618856 ZNF91Q05481 1191 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 MZT1Q08AG7 82 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 RAB40BQ12829 278 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 IL18R1Q13478 541 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 ZNF404Q494X3 552 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 PRAMEF6Q5VXH4 476 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 KCTD20Q7Z5Y7 419 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 PEG10Q86TG7 708 aaKnown RBP6.92□□□□□ -1.3
NEK3-209ENST00000618856 MOGAT3Q86VF5 341 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 FTMTQ8N4E7 242 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 OR1M1Q8NGA1 313 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 OR10H4Q8NGA5 316 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 OR14K1Q8NGZ2 314 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 HPSE2Q8WWQ2 592 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 DACT3Q96B18 629 aaPredicted RBP6.92□□□□□ -1.3
NEK3-209ENST00000618856 RAB39BQ96DA2 213 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 PATZ1Q9HBE1 687 aaKnown RBP6.92□□□□□ -1.3
NEK3-209ENST00000618856 BRD7Q9NPI1 651 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 GPR84Q9NQS5 396 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 YAE1D1Q9NRH1 226 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 C14orf119Q9NWQ9 140 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 NKX1-2Q9UD57 310 aaPredicted RBP6.92□□□□□ -1.3
NEK3-209ENST00000618856 OR52A1Q9UKL2 312 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 PCDHGB1Q9Y5G3 927 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 N6AMT1Q9Y5N5 214 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 HSPE1-MOB4S4R3N1 261 aa6.92□□□□□ -1.3
NEK3-209ENST00000618856 ATRQ13535 2644 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 TRAV20A0A0B4J274 112 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 ZNF816-ZNF321PA0A0X1KG74 233 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 TMEM210A6NLX4 147 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 LRRC30A6NM36 301 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 KIAA1324LA8MWY0 1029 aaPredicted RBP6.91□□□□□ -1.3
NEK3-209ENST00000618856 LOC110117498-PIK3R3F6TDL0 507 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 H0YAE9 185 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 H0YJX3 145 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.91□□□□□ -1.3
NEK3-209ENST00000618856 PLPP2O43688 288 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 CYB5R3P00387 301 aaPredicted RBP6.91□□□□□ -1.3
NEK3-209ENST00000618856 ISG15P05161 165 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 WNT2P09544 360 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 ZFP36P26651 326 aaKnown RBP6.91□□□□□ -1.3
NEK3-209ENST00000618856 MAP2K3P46734 347 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 CCR9P51686 369 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 IL5RAQ01344 420 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 PAX2Q02962 417 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 SLC34A1Q06495 639 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 RIPPLY1Q0D2K3 151 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 ZNF154Q13106 437 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 PRDX4Q13162 271 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 TEX36Q5VZQ5 186 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 TTC23Q5W5X9 447 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 LAIR2Q6ISS4 152 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 PLEKHG7Q6ZR37 379 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 PRIMA1Q86XR5 153 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 C1orf87Q8N0U7 546 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 SYS1Q8N2H4 156 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 MUC20Q8N307 709 aaPredicted RBP6.91□□□□□ -1.3
NEK3-209ENST00000618856 PRSS35Q8N3Z0 413 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 SPICQ8N5J4 248 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 GCSAMQ8N6F7 178 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 ACBD7Q8N6N7 88 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 CCDC54Q8NEL0 328 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 ZNF555Q8NEP9 628 aa6.91□□□□□ -1.3
NEK3-209ENST00000618856 SEMA6DQ8NFY4 1073 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms