RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 RNF7Q9UBF6 113 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 NUFIP1Q9UHK0 495 aaKnown RBP20.87■□□□□ 0.93
PMS1-220ENST00000618056 MPC1Q9Y5U8 109 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 A0A0G2JMP0 313 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 A0A0X1KG70 313 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 SRSF10O75494 262 aaKnown RBP20.86■□□□□ 0.93
PMS1-220ENST00000618056 IGLV3-1P01715 115 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 OR2T7P0C7T2 308 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 GNALP38405 381 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 SNRPGP62308 76 aaKnown RBP20.86■□□□□ 0.93
PMS1-220ENST00000618056 ZBTB49Q6ZSB9 765 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 OR4M2Q8NGB6 313 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 OR2T27Q8NH04 317 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 UBE2FQ969M7 185 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 MBOAT4Q96T53 435 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 SLC29A1Q99808 456 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 APOL4Q9BPW4 351 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 PAPOLGQ9BWT3 736 aaKnown RBP20.86■□□□□ 0.93
PMS1-220ENST00000618056 MOB1AQ9H8S9 216 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 ABCB9Q9NP78 766 aa20.86■□□□□ 0.93
PMS1-220ENST00000618056 A8MXK9 166 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 ZNF205O95201 554 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 CST4P01036 141 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 WNT2P09544 360 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 ZFP36P26651 326 aaKnown RBP20.85■□□□□ 0.93
PMS1-220ENST00000618056 FAM201AQ5SY85 155 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 FAHD2BQ6P2I3 314 aaPredicted RBP20.85■□□□□ 0.93
PMS1-220ENST00000618056 ITPKCQ96DU7 683 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 FAHD2AQ96GK7 314 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 TMEM246Q9BRR3 403 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 MIOXQ9UGB7 285 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 MRM2Q9UI43 246 aaKnown RBP20.85■□□□□ 0.93
PMS1-220ENST00000618056 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.85■□□□□ 0.93
PMS1-220ENST00000618056 LRCH1Q9Y2L9 728 aa20.85■□□□□ 0.93
PMS1-220ENST00000618056 J3QLI3 93 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 CASQ2O14958 399 aaPredicted RBP20.84■□□□□ 0.93
PMS1-220ENST00000618056 GRPP07492 148 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 ATP6V1B1P15313 513 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 LCN2P80188 198 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 IL5RAQ01344 420 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 MFGE8Q08431 387 aaPredicted RBP20.84■□□□□ 0.93
PMS1-220ENST00000618056 OCLNQ16625 522 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 DCAF12L2Q5VW00 463 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 MEDAGQ5VYS4 303 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 SSX6Q7RTT6 188 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 GALNT4Q8N4A0 578 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 C1orf123Q9NWV4 160 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 R4GMQ9 66 aa20.84■□□□□ 0.93
PMS1-220ENST00000618056 A0A1W2PQL4 384 aaPredicted RBP20.83■□□□□ 0.93
PMS1-220ENST00000618056 MAP2K3P46734 347 aa20.83■□□□□ 0.93
PMS1-220ENST00000618056 SEC61A1P61619 476 aaKnown RBP20.83■□□□□ 0.93
PMS1-220ENST00000618056 ESCO2Q56NI9 601 aa20.83■□□□□ 0.93
PMS1-220ENST00000618056 WDR86Q86TI4 376 aa20.83■□□□□ 0.93
PMS1-220ENST00000618056 TMPRSS13Q9BYE2 586 aa20.83■□□□□ 0.93
PMS1-220ENST00000618056 PPP1R3EQ9H7J1 279 aa20.83■□□□□ 0.93
PMS1-220ENST00000618056 LRRC42Q9Y546 428 aa20.83■□□□□ 0.93
PMS1-220ENST00000618056 GMPPBQ9Y5P6 360 aa20.83■□□□□ 0.93
PMS1-220ENST00000618056 A6NLC8 198 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 ANXA2P2A6NMY6 339 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 LOC110117498-PIK3R3F6TDL0 507 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 MAGEB4O15481 346 aaPredicted RBP20.82■□□□□ 0.92
PMS1-220ENST00000618056 ENTPD6O75354 484 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 TTRP02766 147 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 RPS2P15880 293 aaKnown RBP20.82■□□□□ 0.92
PMS1-220ENST00000618056 ATP6V1E1P36543 226 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 SRP14P37108 136 aaKnown RBP20.82■□□□□ 0.92
PMS1-220ENST00000618056 MTNR1AP48039 350 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 ZNF154Q13106 437 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 PRDX4Q13162 271 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 DCDC5Q6ZRR9 648 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 TEX29Q8N6K0 151 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 OR1M1Q8NGA1 313 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 OR51E1Q8TCB6 317 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 TBX5Q99593 518 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 MICU1Q9BPX6 476 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 GPR84Q9NQS5 396 aa20.82■□□□□ 0.92
PMS1-220ENST00000618056 ZNF850A8MQ14 1090 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 SULT1C4O75897 302 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 APOL3O95236 402 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 LHBP01229 141 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 KRT8P05787 483 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 ZNF684Q5T5D7 378 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 ZNF826PQ6ZT77 177 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 C11orf53Q8IXP5 236 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 OR10H4Q8NGA5 316 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 NEIL1Q96FI4 390 aaPredicted RBP20.81■□□□□ 0.92
PMS1-220ENST00000618056 ZNF184Q99676 751 aaPredicted RBP20.81■□□□□ 0.92
PMS1-220ENST00000618056 RTL8AQ9BWD3 113 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 TLNRD1Q9H1K6 362 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 SNX5Q9Y5X3 404 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 ZNF816-ZNF321PA0A0X1KG74 233 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 LGALS8O00214 317 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 AVPP01185 164 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 GABRB1P18505 474 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 PEX2P28328 305 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 KCNJ8Q15842 424 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 ZBTB37Q5TC79 503 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 IZUMO2Q6UXV1 221 aa20.81■□□□□ 0.92
PMS1-220ENST00000618056 C1orf229Q6ZS94 237 aaPredicted RBP20.81■□□□□ 0.92
PMS1-220ENST00000618056 COMMD2Q86X83 199 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms