RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 DVL1P1P54792 670 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 CLDN17P56750 224 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 RAP1BP61224 184 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 NAAAQ02083 359 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 MS4A18Q3C1V0 323 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 MOGAT2Q3SYC2 334 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 ACTBL2Q562R1 376 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 RNASE10Q5GAN6 216 aaKnown RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 ZBTB49Q6ZSB9 765 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 PEG10Q86TG7 708 aaKnown RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 GLCCI1Q86VQ1 547 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 UEVLDQ8IX04 471 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 C20orf196Q8IYI0 205 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 C8orf59Q8N0T1 100 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 NUDT10Q8NFP7 164 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 ZNF417Q8TAU3 575 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 UBASH3BQ8TF42 649 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 NEU4Q8WWR8 484 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 TFAP2CQ92754 450 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 OR2M2Q96R28 347 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 ZNF587Q96SQ5 575 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 ARHGDIGQ99819 225 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 KCTD14Q9BQ13 255 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 CPPED1Q9BRF8 314 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 THTPAQ9BU02 230 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 ZNF426Q9BUY5 554 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 GGACTQ9BVM4 153 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 RSPO3Q9BXY4 272 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 MRPL13Q9BYD1 178 aaKnown RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 SEC61A2Q9H9S3 476 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 GPR35Q9HC97 309 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 DYNLRB1Q9NP97 96 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 GPR160Q9UJ42 338 aa7.35□□□□□ -1.23
GPC6-202ENST00000617456 PRPF19Q9UMS4 504 aaKnown RBP7.35□□□□□ -1.23
GPC6-202ENST00000617456 A0A087X0M5 115 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 A0A096LPE4 126 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 A0A1B0GX30 115 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 A0A1W2PPZ6 126 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 ZNF726A6NNF4 738 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 BBIP1A8MTZ0 92 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 B4DSR2 109 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 FAM157AC9JC47 383 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 PLPP3O14495 311 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 DLEU1O43261 78 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 TPST1O60507 370 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 TPST2O60704 377 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 BGLAPP02818 100 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 RLN2P04090 185 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 THRBP10828 461 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 NR2C1P13056 603 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 CALCRP30988 508 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 THBS4P35443 961 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 MSX2P35548 267 aaPredicted RBP7.34□□□□□ -1.23
GPC6-202ENST00000617456 COMPP49747 757 aaPredicted RBP7.34□□□□□ -1.23
GPC6-202ENST00000617456 MECP2P51608 486 aaKnown RBP7.34□□□□□ -1.23
GPC6-202ENST00000617456 CDH12P55289 794 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 ARF6P62330 175 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 GK3PQ14409 553 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 CYP51A1Q16850 503 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 REP15Q6BDI9 236 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 C1orf94Q6P1W5 598 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 ZNF773Q6PK81 442 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 LINGO2Q7L985 606 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 PTOV1Q86YD1 416 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 C10orf111Q8N326 155 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 ZNF786Q8N393 782 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 OR8J3Q8NGG0 315 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 OR5J2Q8NH18 312 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 STOML3Q8TAV4 291 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 CD300LFQ8TDQ1 290 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 THRSPQ92748 146 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 CORO2AQ92828 525 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 CMTM5Q96DZ9 223 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 TEX12Q9BXU0 123 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 NELFAQ9H3P2 528 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 IKZF5Q9H5V7 419 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 TCF7L1Q9HCS4 588 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 HIF1ANQ9NWT6 349 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 ADAM30Q9UKF2 790 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 RPH3ALQ9UNE2 315 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 SSR3Q9UNL2 185 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 POMPQ9Y244 141 aa7.34□□□□□ -1.23
GPC6-202ENST00000617456 TRAPPC13A5PLN9 417 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 NPIPB13A6NJU9 1138 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 NPIPB4C9JG80 1138 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 GABARAPO95166 117 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 ADRA2AP08913 450 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 FGF2P09038 288 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 CECR9P0C854 216 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 SPNP16150 400 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 NPR2P20594 1047 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 RBM34P42696 430 aaKnown RBP7.33□□□□□ -1.24
GPC6-202ENST00000617456 PSME3P61289 254 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 ARF1P84077 181 aaKnown RBP7.33□□□□□ -1.24
GPC6-202ENST00000617456 HOXC5Q00444 222 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 HGFACQ04756 655 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 TNFRSF9Q07011 255 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 SCGB2A2Q13296 93 aa7.33□□□□□ -1.24
GPC6-202ENST00000617456 VMACQ2NL98 169 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms