RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CA10Q9NS85 328 aa13.75□□□□□ -0.21
NR1H3-235ENST00000616973 ZNF391Q9UJN7 358 aa13.75□□□□□ -0.21
NR1H3-235ENST00000616973 PIGLQ9Y2B2 252 aa13.75□□□□□ -0.21
NR1H3-235ENST00000616973 KLF13Q9Y2Y9 288 aaPredicted RBP13.75□□□□□ -0.21
NR1H3-235ENST00000616973 GPR179Q6PRD1 2367 aa13.75□□□□□ -0.21
NR1H3-235ENST00000616973 TMEM82A0PJX8 343 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 OR14I1A6ND48 311 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 NME2P1O60361 137 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 SNAPC5O75971 98 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 MPIG6BO95866 241 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 CELA3AP09093 270 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 GNB3P16520 340 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 FAHP16930 419 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 NME2P22392 152 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 CD82P27701 267 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 PTGFRP43088 359 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 MAGEA5P43359 124 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 RNASE10Q5GAN6 216 aaKnown RBP13.74□□□□□ -0.21
NR1H3-235ENST00000616973 ZNF774Q6NX45 483 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 LINC00696Q6ZRV3 163 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 CHMP1BQ7LBR1 199 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 SLC16A14Q7RTX9 510 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 IL22RA1Q8N6P7 574 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 OR52B4Q8NGK2 314 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 HAS2Q92819 552 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 SLC6A7Q99884 636 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 OR2H1Q9GZK4 316 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 CST11Q9H112 138 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 RNF122Q9H9V4 155 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 PLA2G3Q9NZ20 509 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 NOSIPQ9Y314 301 aaKnown RBP13.74□□□□□ -0.21
NR1H3-235ENST00000616973 SSX5O60225 188 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 TPOP07202 933 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 SP1P08047 785 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 HIST1H1DP16402 221 aaKnown RBP13.74□□□□□ -0.21
NR1H3-235ENST00000616973 NAT1P18440 290 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 PSG4Q00888 419 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 DHODHQ02127 395 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 MUC20Q8N307 709 aaPredicted RBP13.74□□□□□ -0.21
NR1H3-235ENST00000616973 TMEM251Q8N6I4 163 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 SEMA6DQ8NFY4 1073 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 NUDCD2Q8WVJ2 157 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 RAB3CQ96E17 227 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 IFT46Q9NQC8 304 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.74□□□□□ -0.21
NR1H3-235ENST00000616973 PARPBPQ9NWS1 579 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 PLEKHA6Q9Y2H5 1048 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 KNTC1P50748 2209 aa13.74□□□□□ -0.21
NR1H3-235ENST00000616973 OR6C65A6NJZ3 312 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 MRPL33O75394 65 aaKnown RBP13.73□□□□□ -0.21
NR1H3-235ENST00000616973 CRTAPO75718 401 aaPredicted RBP13.73□□□□□ -0.21
NR1H3-235ENST00000616973 SYNGR4O95473 234 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 RFC3P40938 356 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 RPS27AP62979 156 aaKnown RBP13.73□□□□□ -0.21
NR1H3-235ENST00000616973 HGFACQ04756 655 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 MPPED2Q15777 294 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 LGALSLQ3ZCW2 172 aaPredicted RBP13.73□□□□□ -0.21
NR1H3-235ENST00000616973 PLAC9Q5JTB6 97 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 SKA3Q8IX90 412 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 OR2AK2Q8NG84 335 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 OR4S1Q8NGB4 309 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 OR13C8Q8NGS7 320 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 ASB13Q8WXK3 278 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 SPSB1Q96BD6 273 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 SLX1AQ9BQ83 275 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 CHST6Q9GZX3 395 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 WNT5BQ9H1J7 359 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 POFUT1Q9H488 388 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 RGCCQ9H4X1 137 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 ATPIF1Q9UII2 106 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 KCNK7Q9Y2U2 307 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 TTC28Q96AY4 2481 aa13.73□□□□□ -0.21
NR1H3-235ENST00000616973 KLRC4-KLRK1H3BQV0 150 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 H3BUI4 141 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 RPL36A-HNRNPH2H7BZ11 118 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 MFNGO00587 321 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 SOCS1O15524 211 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 FARS2O95363 451 aaKnown RBP13.72□□□□□ -0.21
NR1H3-235ENST00000616973 HTR5AP47898 357 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 TMEM50BP56557 158 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 SOX8P57073 446 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 GNG2P59768 71 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 PLGLB1Q02325 96 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 RIPPLY1Q0D2K3 151 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 TSPO2Q5TGU0 170 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 STEAP2Q8NFT2 490 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 AKR7LQ8NHP1 331 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 REEP6Q96HR9 211 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 TMPRSS13Q9BYE2 586 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 SLC6A15Q9H2J7 730 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 BANF2Q9H503 90 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 TMEM165Q9HC07 324 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 SLC23A1Q9UHI7 598 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 CNTRLQ7Z7A1 2325 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 AHCTF1Q8WYP5 2266 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 A6NL46 340 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 FAM166BA8MTA8 275 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 FOXI3A8MTJ6 420 aaPredicted RBP13.72□□□□□ -0.21
NR1H3-235ENST00000616973 ZNF724A8MTY0 619 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 MMP7P09237 267 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms