RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 OR6K6Q8NGW6 343 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 RHOXF1Q8NHV9 184 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 FAM81AQ8TBF8 368 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 RNF133Q8WVZ7 376 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 SPSB4Q96A44 273 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 INTS14Q96SY0 518 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 OPA3Q9H6K4 179 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 TMEM100Q9NV29 134 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 TVP23BQ9NYZ1 205 aa15.81■□□□□ 0.12
CDX1-202ENST00000616154 IGHV3OR16-10A0A075B7F0 116 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 IGHV3-64DA0A0J9YX35 117 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 KIR2DS1A0A191URI9 304 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 POM121CA8CG34 1229 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 PRODHO43272 600 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 KCNAB3O43448 404 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 PTBP3O95758 552 aaKnown RBP15.8■□□□□ 0.12
CDX1-202ENST00000616154 CLIC3O95833 236 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 PAICSP22234 425 aaKnown RBP15.8■□□□□ 0.12
CDX1-202ENST00000616154 MYF6P23409 242 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 GSTT1P30711 240 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 PMELP40967 661 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 PITPNBP48739 271 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 SNAPC1Q16533 368 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 PGAP1Q75T13 922 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 ENTHD1Q8IYW4 607 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 SETD9Q8NE22 299 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 OR8B3Q8NGG8 313 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 TMEM163Q8TC26 289 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 OR8B2Q96RD0 313 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 APOL4Q9BPW4 351 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 COPS4Q9BT78 406 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 MED20Q9H944 212 aa15.8■□□□□ 0.12
CDX1-202ENST00000616154 TRAV40A0A0B4J280 105 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 CD300LBA8K4G0 201 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 MPZL2O60487 215 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 CD200P41217 278 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 SLC15A1P46059 708 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 GRB2P62993 217 aaKnown RBP15.79■□□□□ 0.12
CDX1-202ENST00000616154 ZNF92Q03936 586 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 SHFQ7M4L6 423 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 PRSS45Q7RTY3 260 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 DPY19L4Q7Z388 723 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 TCEANCQ8N8B7 351 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 Q8TCH9 128 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 UBE2FQ969M7 185 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 ERGIC1Q969X5 290 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 ABHD6Q9BV23 337 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 SLC22A4Q9H015 551 aa15.79■□□□□ 0.12
CDX1-202ENST00000616154 NOP16Q9Y3C1 178 aaKnown RBP15.79■□□□□ 0.12
CDX1-202ENST00000616154 SOX21Q9Y651 276 aaPredicted RBP15.79■□□□□ 0.12
CDX1-202ENST00000616154 CMYA5Q8N3K9 4069 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 C5orf63A6NC05 138 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 PRR23D1E9PI22 279 aaPredicted RBP15.78■□□□□ 0.12
CDX1-202ENST00000616154 M0R129 80 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 PHYHO14832 338 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 HLA-DPB1P04440 258 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 PRR23D2P0DMB1 279 aaPredicted RBP15.78■□□□□ 0.12
CDX1-202ENST00000616154 IRF2P14316 349 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 SLC2A5P22732 501 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 OPRL1P41146 370 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 MAB21L1Q13394 359 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 OCLNQ16625 522 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 SLC35D3Q5M8T2 416 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 FAM201AQ5SY85 155 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 GLYATL3Q5SZD4 288 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 AADACL4Q5VUY2 407 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 PLBD1Q6P4A8 553 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 DCDC5Q6ZRR9 648 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 MRPL21Q7Z2W9 205 aaKnown RBP15.78■□□□□ 0.12
CDX1-202ENST00000616154 C8orf59Q8N0T1 100 aaPredicted RBP15.78■□□□□ 0.12
CDX1-202ENST00000616154 NUDT16L1Q9BRJ7 211 aaKnown RBP15.78■□□□□ 0.12
CDX1-202ENST00000616154 SLITRK2Q9H156 845 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 IMPAD1Q9NX62 359 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 MRPL15Q9P015 296 aaKnown RBP15.78■□□□□ 0.12
CDX1-202ENST00000616154 CLN8Q9UBY8 286 aa15.78■□□□□ 0.12
CDX1-202ENST00000616154 WBP4O75554 376 aaKnown RBP15.77■□□□□ 0.12
CDX1-202ENST00000616154 PRSS12P56730 875 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 EIF2B1Q14232 305 aaKnown RBP15.77■□□□□ 0.12
CDX1-202ENST00000616154 WDR25Q64LD2 544 aaPredicted RBP15.77■□□□□ 0.12
CDX1-202ENST00000616154 THAP5Q7Z6K1 395 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 ERI1Q8IV48 349 aaKnown RBP15.77■□□□□ 0.12
CDX1-202ENST00000616154 ZNF454Q8N9F8 522 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 OR11L1Q8NGX0 322 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 OR6N2Q8NGY6 317 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 OTOSQ8NHW6 89 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 APH1BQ8WW43 257 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 IL4I1Q96RQ9 567 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 PRDM13Q9H4Q3 707 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 Q9H521 79 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 CENPMQ9NSP4 180 aa15.77■□□□□ 0.12
CDX1-202ENST00000616154 MDFIC2A0A1B0GVS7 189 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 XRCC2O43543 280 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 APOC1P02654 83 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 PRKXP51817 358 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 NXNL2Q5VZ03 156 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 LAIR2Q6ISS4 152 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 C16orf87Q6PH81 154 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 LYPD2Q6UXB3 125 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 ZNF841Q6ZN19 808 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 CPOQ8IVL8 374 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms