RNA–Protein interactions for RNA: ENST00000613670.4

LIG1-221, Transcript of DNA ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LIG1, Length 3,949 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-221ENST00000613670 MRPS21P82921 87 aaKnown RBP11.21□□□□□ -0.61
LIG1-221ENST00000613670 IGSF11Q5DX21 431 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 PRSS54Q6PEW0 395 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 LIN37Q96GY3 246 aaPredicted RBP11.21□□□□□ -0.61
LIG1-221ENST00000613670 PFDN5Q99471 154 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 MSGN1A6NI15 193 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 IFNA17P01571 189 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 FAHP16930 419 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 TUBG1P23258 451 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 FCARP24071 287 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 F2RL1P55085 397 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 PCK2Q16822 640 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 MIDNQ504T8 468 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 PABPC1L2AQ5JQF8 200 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 Q6ZS52 159 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 SLC26A10Q8NG04 563 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 FBXL17Q9UF56 701 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 TMEM184BQ9Y519 407 aaPredicted RBP11.21□□□□□ -0.61
LIG1-221ENST00000613670 KPTNQ9Y664 436 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 THSD7BQ9C0I4 1608 aa11.21□□□□□ -0.61
LIG1-221ENST00000613670 FRMPD3Q5JV73 1810 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 ALG1L2C9J202 215 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 TXNDC12O95881 172 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 MST1P26927 711 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 PTGFRP43088 359 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 CSNK1A1P48729 337 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 NDUFA6P56556 154 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 HNF4GQ14541 408 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 ZNF260Q3ZCT1 412 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 ZNF684Q5T5D7 378 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 BRICD5Q6PL45 260 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 IL34Q6ZMJ4 242 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 TMEM182Q6ZP80 229 aaPredicted RBP11.21□□□□□ -0.62
LIG1-221ENST00000613670 ARRDC1Q8N5I2 433 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 ZSCAN4Q8NAM6 433 aaPredicted RBP11.21□□□□□ -0.62
LIG1-221ENST00000613670 FLVCR1-AS1Q8TAF5 88 aa11.21□□□□□ -0.62
LIG1-221ENST00000613670 YBX2Q9Y2T7 364 aaKnown RBP11.21□□□□□ -0.62
LIG1-221ENST00000613670 HSPA12AO43301 675 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 JTBO76095 146 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 PTAFRP25105 342 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 PDCD1Q15116 288 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 C8orf44Q96CB5 159 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 BORCS8Q96FH0 119 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 CLCC1Q96S66 551 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 NRIP2Q9BQI9 281 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 MPTX1A8MV57 137 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 PHF1O43189 567 aaPredicted RBP11.2□□□□□ -0.62
LIG1-221ENST00000613670 GSTP1P09211 210 aaKnown RBP11.2□□□□□ -0.62
LIG1-221ENST00000613670 NME1P15531 152 aaKnown RBP11.2□□□□□ -0.62
LIG1-221ENST00000613670 ZNF16P17020 682 aaPredicted RBP11.2□□□□□ -0.62
LIG1-221ENST00000613670 TBPP20226 339 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 C20orf196Q8IYI0 205 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 SYT3Q9BQG1 590 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 UTP23Q9BRU9 249 aaKnown RBP11.2□□□□□ -0.62
LIG1-221ENST00000613670 RTN4RQ9BZR6 473 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 GPR173Q9NS66 373 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 PADI1Q9ULC6 663 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 PIGLQ9Y2B2 252 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 IGLV1-36A0A0B4J1U3 117 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 hCG_1809904A0A1W2PP81 198 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 A0A1W2PR64 198 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 A0A1W2PRV1 198 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 A6NLC8 198 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 FABP1P07148 127 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 ZNF728P0DKX0 622 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 EPHA1P21709 976 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 PNLIPRP2P54317 469 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 IKZF1Q13422 519 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 TGIF1Q15583 401 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 USF2Q15853 346 aaPredicted RBP11.2□□□□□ -0.62
LIG1-221ENST00000613670 C9orf50Q5SZB4 431 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 SHEQ5VZ18 495 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 OR14K1Q8NGZ2 314 aa11.2□□□□□ -0.62
LIG1-221ENST00000613670 OR7C1O76099 320 aaPredicted RBP11.19□□□□□ -0.62
LIG1-221ENST00000613670 CD8AP01732 235 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 CD37P11049 281 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 CALCRP30988 508 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 KIAA0141Q14154 515 aaPredicted RBP11.19□□□□□ -0.62
LIG1-221ENST00000613670 PHF19Q5T6S3 580 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 C6orf201Q7Z4U5 140 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 SLC22A18ASQ8N1D0 253 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 WDSUB1Q8N9V3 476 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 STT3BQ8TCJ2 826 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 EMG1Q92979 244 aaKnown RBP11.19□□□□□ -0.62
LIG1-221ENST00000613670 RAB18Q9NP72 206 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 MMP24Q9Y5R2 645 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 HSPB6O14558 160 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 TTRP02766 147 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 OR5H8P0DN80 308 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 TMEM33P57088 247 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 ETV3LQ6ZN32 361 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 RPS4Y2Q8TD47 263 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 GABRG3Q99928 467 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 PLXNA2O75051 1894 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 NUDT19A8MXV4 375 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 CDC14BO60729 498 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 RBMXL2O75526 392 aaKnown RBP11.19□□□□□ -0.62
LIG1-221ENST00000613670 DBHP09172 617 aa11.19□□□□□ -0.62
LIG1-221ENST00000613670 UBE2KP61086 200 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms