RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 LINC00052Q96N35 136 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 TXLNGYQ9BZA5 131 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 GAR1Q9NY12 217 aaKnown RBP13.93□□□□□ -0.18
TNXB-209ENST00000613214 CDK5RAP2Q96SN8 1893 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 SOX8P57073 446 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 OR1B1Q8NGR6 318 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 UBR2Q8IWV8 1755 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 A0A1W2PNV4 684 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 CELA2BP08218 269 aaPredicted RBP13.93□□□□□ -0.18
TNXB-209ENST00000613214 CAPZBP47756 277 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 PCBP4P57723 403 aaKnown RBP13.93□□□□□ -0.18
TNXB-209ENST00000613214 VAMP3Q15836 100 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 SYT14P1Q58G82 188 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 TMEM196Q5HYL7 178 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 OR4C3Q8NH37 302 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 DLL4Q9NR61 685 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 PPIL1Q9Y3C6 166 aa13.93□□□□□ -0.18
TNXB-209ENST00000613214 KNDC1Q76NI1 1749 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 IGHV3OR16-12A0A075B7B8 117 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 ATP6V1G2-DDX39BF2Z307 99 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 ACOT8O14734 319 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 RNASEKQ6P5S7 137 aaKnown RBP13.92□□□□□ -0.18
TNXB-209ENST00000613214 POM121L2Q96KW2 1035 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 OR51I2Q9H344 312 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 AAMDCQ9H7C9 122 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 A0A1W2PPQ1 181 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 ZNF716A6NP11 495 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 PPP1R2P9O14990 202 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 PLRG1O43660 514 aaKnown RBP13.92□□□□□ -0.18
TNXB-209ENST00000613214 DUS4LO95620 317 aaKnown RBP13.92□□□□□ -0.18
TNXB-209ENST00000613214 SMIM21Q3B7S5 101 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 KPTNQ9Y664 436 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 A0A0A6YYJ9 748 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 XKRY2A2RUG3 117 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 B3GNTL1Q67FW5 361 aaPredicted RBP13.92□□□□□ -0.18
TNXB-209ENST00000613214 PTPMT1Q8WUK0 201 aaPredicted RBP13.92□□□□□ -0.18
TNXB-209ENST00000613214 TRIP6Q15654 476 aaKnown RBP13.92□□□□□ -0.18
TNXB-209ENST00000613214 MICBQ29980 383 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 TIGITQ495A1 244 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 CLEC9AQ6UXN8 241 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 MORN4Q8NDC4 146 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 ADGRG7Q96K78 797 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 LRP6O75581 1613 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 SETD1AO15047 1707 aaKnown RBP13.92□□□□□ -0.18
TNXB-209ENST00000613214 IGKV3D-15A0A087WSY6 115 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 TMPRSS2O15393 492 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 IGKV3-15P01624 115 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 NID1P14543 1247 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 ABCD3P28288 659 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 G6PCP35575 357 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 FMODQ06828 376 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 CDH26Q8IXH8 852 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 KTI12Q96EK9 354 aaPredicted RBP13.92□□□□□ -0.18
TNXB-209ENST00000613214 BTF3L4Q96K17 158 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 LAT2Q9GZY6 243 aa13.92□□□□□ -0.18
TNXB-209ENST00000613214 RNASE1P07998 156 aaKnown RBP13.91□□□□□ -0.18
TNXB-209ENST00000613214 OR52N4Q8NGI2 321 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 CHODLQ9H9P2 273 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 H7BYZ3 331 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 CD3DP04234 171 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 TFPI2P48307 235 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 CLDN23Q96B33 292 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 NUDT9Q9BW91 350 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 MMP25Q9NPA2 562 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 RFPL4AA6NLU0 287 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 RFPL4AL1F8VTS6 287 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 PTHLHP12272 177 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 IL9P15248 144 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 FBXO34Q9NWN3 711 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 IGHV3OR15-7A0A075B7D8 119 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 METTL12A8MUP2 240 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 ARNTP27540 789 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 RPS4XP62701 263 aaKnown RBP13.91□□□□□ -0.18
TNXB-209ENST00000613214 TNFAIP6P98066 277 aaPredicted RBP13.91□□□□□ -0.18
TNXB-209ENST00000613214 OXA1LQ15070 435 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 FAM27D1Q5T7N8 215 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 DRAXINQ8NBI3 349 aaPredicted RBP13.91□□□□□ -0.18
TNXB-209ENST00000613214 RBPMSQ93062 196 aaKnown RBP13.91□□□□□ -0.18
TNXB-209ENST00000613214 SLC26A1Q9H2B4 701 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 ZMAT5Q9UDW3 170 aaKnown RBP13.91□□□□□ -0.18
TNXB-209ENST00000613214 MGPP08493 103 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 PDZK1IP1Q13113 114 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 Q3ZCU0 254 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 HSD17B13Q7Z5P4 300 aaPredicted RBP13.91□□□□□ -0.18
TNXB-209ENST00000613214 ARL6IP6Q8N6S5 226 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 ARHGDIGQ99819 225 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 TMPRSS5Q9H3S3 457 aa13.91□□□□□ -0.18
TNXB-209ENST00000613214 CRYABP02511 175 aaKnown RBP13.9□□□□□ -0.18
TNXB-209ENST00000613214 USF1P22415 310 aaPredicted RBP13.9□□□□□ -0.18
TNXB-209ENST00000613214 EPHA2P29317 976 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 ARIH2OSQ8N7S6 290 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 KCNE3Q9Y6H6 103 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 MRPS14O60783 128 aaKnown RBP13.9□□□□□ -0.18
TNXB-209ENST00000613214 MT-CO3P00414 261 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 TNXAQ16473 311 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 RHOXF1Q8NHV9 184 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 SCPEP1Q9HB40 452 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 DIO1P49895 249 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 VWA1Q6PCB0 445 aa13.9□□□□□ -0.18
TNXB-209ENST00000613214 SMIM7Q9BQ49 75 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms