RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 CTXN2P0C2S0 81 aa11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 EPHA8P29322 1005 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 MRM1Q6IN84 353 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 PWWP2BQ6NUJ5 590 aa11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 LHFPL2Q6ZUX7 228 aa11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 SSX7Q7RTT5 188 aa11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 ZNF573Q86YE8 665 aa11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 HIPK2Q9H2X6 1198 aa11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 TAF9BQ9HBM6 251 aa11.23□□□□□ -0.61
TNFAIP3-206ENST00000612899 CCDC187A0A096LP49 1063 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 TGOLN2O43493 480 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 PSG6Q00889 435 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 SPATA46Q5T0L3 261 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 CD300LDQ6UXZ3 194 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 LSRQ86X29 649 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 TAAR9Q96RI9 348 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 RPH3ALQ9UNE2 315 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 NCOR1O75376 2440 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 BTBD17A6NE02 478 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 SLC22A20A6NK97 555 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 LRRC30A6NM36 301 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 SPRY1O43609 319 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 CD300CQ08708 224 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 IL11RAQ14626 422 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 RBMS3Q6XE24 437 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 ADGRL4Q9HBW9 690 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 PPP1R3CQ9UQK1 317 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 A0A1W2PPV9 198 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 C4orf47A7E2U8 309 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 C5orf67F2Z3F1 127 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 ST8SIA5O15466 376 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 SDHBP21912 280 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 DUSP1P28562 367 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 MMP15P51511 669 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 LSM11P83369 360 aaKnown RBP eCLIP11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 ZNF705AQ6ZN79 300 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 SFTPA2Q8IWL1 248 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 OR2G3Q8NGZ4 309 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 ZPBPQ9BS86 351 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 AKAP6Q13023 2319 aa11.22□□□□□ -0.61
TNFAIP3-206ENST00000612899 A0A1B0GUH1 482 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 LEUTXA8MZ59 168 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 C17orf112F2Z3M2 114 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 RD3LP0DJH9 198 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 GLRA1P23415 457 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 C1QL3Q5VWW1 255 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 H3F3CQ6NXT2 135 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 C8orf82Q6P1X6 216 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 CLEC9AQ6UXN8 241 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 ANKRD37Q7Z713 158 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 YIPF5Q969M3 257 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 BORCS7Q96B45 105 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 PROCRQ9UNN8 238 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 CTLA4P16410 223 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 PCMT1P22061 227 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 TMEM268Q5VZI3 342 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 ACOT7LQ6ZUV0 252 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 NLRC3Q7RTR2 1065 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 ZDHHC23Q8IYP9 409 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 EXD3Q8N9H8 876 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 RELL2Q8NC24 303 aaPredicted RBP11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 OR1S2Q8NGQ3 325 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 EGLN1Q9GZT9 426 aa11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 PURGQ9UJV8 347 aaKnown RBP11.21□□□□□ -0.61
TNFAIP3-206ENST00000612899 PMS2P1A4D2B8 440 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 NKX6-3A6NJ46 265 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZFP92A6NM28 416 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 HRKO00198 91 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 SH2D1BO14796 132 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 CHRNB4P30926 498 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 NOVA1P51513 510 aaKnown RBP11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 RAB11AP62491 216 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 OR1C1Q15619 314 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 CD226Q15762 336 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF141Q15928 474 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 H2BFWTQ7Z2G1 175 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZAR1Q86SH2 424 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 ARV1Q9H2C2 271 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 MIOXQ9UGB7 285 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 FIGNL2A6NMB9 653 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 PYCARD-AS1I3L0S3 204 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 OR2F2O95006 317 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 WISP3O95389 354 aaPredicted RBP11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 NDUFA6P56556 154 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 FZD5Q13467 585 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 OR2F1Q13607 317 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 SNTB1Q13884 538 aaKnown RBP11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 ACER2Q5QJU3 275 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 PRAMEF5Q5TYX0 476 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 PRAMEF6Q5VXH4 476 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 RTN4IP1Q8WWV3 396 aaPredicted RBP11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 TSPAN32Q96QS1 320 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 TINAGL1Q9GZM7 467 aaPredicted RBP11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 ARFGEF1Q9Y6D6 1849 aa11.21□□□□□ -0.62
TNFAIP3-206ENST00000612899 H3BMH7 237 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms