RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 INSM1Q01101 510 aaPredicted RBP9.69□□□□□ -0.86
FAM3A-221ENST00000612856 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 CEACAM16Q2WEN9 425 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF658BQ4V348 819 aaPredicted RBP9.69□□□□□ -0.86
FAM3A-221ENST00000612856 FJX1Q86VR8 437 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 TPRA1Q86W33 373 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 C9orf40Q8IXQ3 194 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 SPTSSAQ969W0 71 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 HINT2Q9BX68 163 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 FGF20Q9NP95 211 aaPredicted RBP9.69□□□□□ -0.86
FAM3A-221ENST00000612856 LRRK1Q38SD2 2015 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 FIGNL2A6NMB9 653 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 RAB3DO95716 219 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 TAS2R43P59537 309 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 HACD4Q5VWC8 232 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 MEPCEQ7L2J0 689 aaKnown RBP9.69□□□□□ -0.86
FAM3A-221ENST00000612856 CAMKMTQ7Z624 323 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF649Q9BS31 505 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 METTL8Q9H825 291 aaKnown RBP9.69□□□□□ -0.86
FAM3A-221ENST00000612856 SMCO4Q9NRQ5 59 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 C2orf16Q68DN1 1984 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 HEATR1Q9H583 2144 aaKnown RBP9.68□□□□□ -0.86
FAM3A-221ENST00000612856 hCG_1809904A0A1W2PP81 198 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 A0A1W2PR64 198 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 A0A1W2PRV1 198 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 FRG2CA6NGY1 282 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 NPIPB8E9PQR5 432 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 CRTAPO75718 401 aaPredicted RBP9.68□□□□□ -0.86
FAM3A-221ENST00000612856 SLC37A1P57057 533 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF674Q2M3X9 581 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 RNF212Q495C1 297 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 OR2B11Q5JQS5 317 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 AWAT2Q6E213 333 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF565Q8N9K5 539 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 POM121Q96HA1 1249 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 SARGQ9BW04 601 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 PILRAQ9UKJ1 303 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 V9GY05 133 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 A0A087WV62 115 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF705GA8MUZ8 300 aaPredicted RBP9.68□□□□□ -0.86
FAM3A-221ENST00000612856 MED6O75586 246 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 HLA-HP01893 362 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 SERPINA2P20848 420 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 HTR1FP30939 366 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 CD96P40200 585 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 CDNFQ49AH0 187 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 MOB3CQ70IA8 216 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 HCAR1Q9BXC0 346 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 COA4Q9NYJ1 87 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 MTORP42345 2549 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 A0A0D9SG52 128 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 OR7C1O76099 320 aaPredicted RBP9.68□□□□□ -0.86
FAM3A-221ENST00000612856 NKX2-2O95096 273 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 CT45A8P0DMV1 189 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 CT45A9P0DMV2 189 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 H2BFSP57053 126 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 MFAP5Q13361 173 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 KIAA0141Q14154 515 aaPredicted RBP9.68□□□□□ -0.86
FAM3A-221ENST00000612856 RSU1Q15404 277 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 C2orf68Q2NKX9 166 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 CT45A2Q5DJT8 189 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 OR10K2Q6IF99 312 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 COX15Q7KZN9 410 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 FAM24BQ8N5W8 94 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 OR14K1Q8NGZ2 314 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 ABHD5Q8WTS1 349 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 HOXB13Q92826 284 aaPredicted RBP9.68□□□□□ -0.86
FAM3A-221ENST00000612856 TMEM106AQ96A25 262 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 ZBTB8AQ96BR9 441 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 PLPPR2Q96GM1 343 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 IP6K3Q96PC2 410 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 CHST6Q9GZX3 395 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 POFUT1Q9H488 388 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 TREM2Q9NZC2 230 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 A4GNTQ9UNA3 340 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 RAXQ9Y2V3 346 aa9.68□□□□□ -0.86
FAM3A-221ENST00000612856 GTF3C1Q12789 2109 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 SERTM1A2A2V5 107 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 PRR33A8MZF0 331 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 TIMM8AO60220 97 aaPredicted RBP9.67□□□□□ -0.86
FAM3A-221ENST00000612856 SFTPBP07988 381 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 SMIM6P0DI80 62 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 LIFP15018 202 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 SPI1P17947 270 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 CFHR1Q03591 330 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 CLN3Q13286 438 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 PLEKHN1Q494U1 663 aaPredicted RBP9.67□□□□□ -0.86
FAM3A-221ENST00000612856 UBE2NLQ5JXB2 153 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 CXorf67Q86X51 503 aaPredicted RBP9.67□□□□□ -0.86
FAM3A-221ENST00000612856 FAM71CQ8NEG0 241 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 ABHD3Q8WU67 409 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 TAAR8Q969N4 342 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 TMEM82A0PJX8 343 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 C5orf49A4QMS7 147 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 A6NIZ1 184 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 GABARAPH6UMI1 98 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 M0R1B8 84 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 EIF4E2O60573 245 aaKnown RBP9.67□□□□□ -0.86
FAM3A-221ENST00000612856 MPZL1O95297 269 aa9.67□□□□□ -0.86
FAM3A-221ENST00000612856 SCGB1D2O95969 90 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms