RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MDP1Q86V88 176 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 SKA3Q8IX90 412 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF679Q8IYX0 411 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 PRSS35Q8N3Z0 413 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 THEM6Q8WUY1 208 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 THRSPQ92748 146 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 ST6GAL2Q96JF0 529 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 C4orf45Q96LM5 186 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 AMELYQ99218 206 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 B3GNT2Q9NY97 397 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF224Q9NZL3 707 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 KCNG2Q9UJ96 466 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 IKZF2Q9UKS7 526 aa7.65□□□□□ -1.18
SMAD4-217ENST00000611848 RAI1Q7Z5J4 1906 aaPredicted RBP7.65□□□□□ -1.18
SMAD4-217ENST00000611848 MYO9AB2RTY4 2548 aa7.65□□□□□ -1.19
SMAD4-217ENST00000611848 CSMD1Q96PZ7 3565 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 USF3Q68DE3 2245 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 A0A0B4J203 849 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 IGHV1-18A0A0C4DH31 117 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 FAM240BA0A1B0GVZ2 78 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 KHDRBS3O75525 346 aaKnown RBP7.64□□□□□ -1.19
SMAD4-217ENST00000611848 PLAUP00749 431 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 IGLV1-44P01699 117 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 HLA-HP01893 362 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 CALCBP10092 127 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 SLC6A1P30531 599 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 RPS27P42677 84 aaKnown RBP7.64□□□□□ -1.19
SMAD4-217ENST00000611848 MAGEB1P43366 347 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 KIR3DL2P43630 455 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 INPP1P49441 399 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 RAB1AP62820 205 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 GPR176Q14439 515 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 ETFDHQ16134 617 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 PCK2Q16822 640 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 SLC36A2Q495M3 483 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 PLA1AQ53H76 456 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 ATAD3CQ5T2N8 411 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 FAM27BQ5VT28 67 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 RSBN1Q5VWQ0 802 aaPredicted RBP7.64□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF57Q68EA5 555 aaPredicted RBP7.64□□□□□ -1.19
SMAD4-217ENST00000611848 TMEM53Q6P2H8 277 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 SLC22A25Q6T423 547 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 C20orf204Q6ZNR8 217 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 FOXL2NBQ6ZUU3 175 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 SLC16A14Q7RTX9 510 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF671Q8TAW3 534 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 LGALS14Q8TCE9 139 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 GPR148Q8TDV2 347 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 SLC7A6Q92536 515 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 NINJ1Q92982 152 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 YIPF5Q969M3 257 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 NABP1Q96AH0 204 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 CREB3L1Q96BA8 519 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 ORAI1Q96D31 301 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 COMMD4Q9H0A8 199 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 HDHD2Q9H0R4 259 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 SLITRK2Q9H156 845 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 SEC61A2Q9H9S3 476 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 ELOVL3Q9HB03 270 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF221Q9UK13 617 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 PAIP2BQ9ULR5 123 aaKnown RBP7.64□□□□□ -1.19
SMAD4-217ENST00000611848 V9GY05 133 aa7.64□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF503-AS2A6NEH8 195 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 A6NIN4 97 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 SHISA9B4DS77 424 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 HS3ST1O14792 307 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 SRSF10O75494 262 aaKnown RBP7.63□□□□□ -1.19
SMAD4-217ENST00000611848 TPPPO94811 219 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 HLA-DQA2P01906 255 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 CRYAAP02489 173 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 CST2P09228 141 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 CECR9P0C854 216 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 ADRA2CP18825 462 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 MSR1P21757 451 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 DNASE1P24855 282 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 LAP3P28838 519 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 CDAP32320 146 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 IDH3GP51553 393 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-217ENST00000611848 SCAND1P57086 179 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 BTG1P62324 171 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 GLO1Q04760 184 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 SGCAQ16586 387 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 MEP1BQ16820 701 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF672Q499Z4 452 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-217ENST00000611848 WDR38Q5JTN6 314 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 KCTD18Q6PI47 426 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-217ENST00000611848 CMTM4Q8IZR5 234 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 LRRC18Q8N456 261 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF676Q8N7Q3 588 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 ZNF611Q8N823 705 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 DTX3Q8N9I9 347 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 SLC26A10Q8NG04 563 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 AKAP1Q92667 903 aaKnown RBP eCLIP7.63□□□□□ -1.19
SMAD4-217ENST00000611848 FBXW5Q969U6 566 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 UPRTQ96BW1 309 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 SLC25A38Q96DW6 304 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 ABCG5Q9H222 651 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 UBTD1Q9HAC8 227 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 PLEKHA1Q9HB21 404 aa7.63□□□□□ -1.19
SMAD4-217ENST00000611848 TCF7L1Q9HCS4 588 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms