RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 HIST1H2BCP62807 126 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 NKX6-1P78426 367 aaPredicted RBP10.61□□□□□ -0.71
TP53-220ENST00000610623 ID2Q02363 134 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 ROM1Q03395 351 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 ZNF616Q08AN1 781 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 MGAT2Q10469 447 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 CCINQ13939 588 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 UBE2V2Q15819 145 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 HIST2H2BEQ16778 126 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 ZNF674Q2M3X9 581 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 ANKRD55Q3KP44 614 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 KHDC3LQ587J8 217 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 MESTQ5EB52 335 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 SOHLH1Q5JUK2 328 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.61□□□□□ -0.71
TP53-220ENST00000610623 OR6X1Q8NH79 312 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 HIST1H2BHQ93079 126 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 HIST1H2BNQ99877 126 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 HIST1H2BMQ99879 126 aa10.61□□□□□ -0.71
TP53-220ENST00000610623 UNKLQ9H9P5 680 aaKnown RBP10.61□□□□□ -0.71
TP53-220ENST00000610623 STRAPQ9Y3F4 350 aaKnown RBP10.61□□□□□ -0.71
TP53-220ENST00000610623 LAMA2P24043 3122 aaKnown RBP10.6□□□□□ -0.71
TP53-220ENST00000610623 FIGNL2A6NMB9 653 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 ZNF726A6NNF4 738 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 NME2P1O60361 137 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 ZNF217O75362 1048 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 GPR75O95800 540 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 ZNF10P21506 573 aaPredicted RBP10.6□□□□□ -0.71
TP53-220ENST00000610623 FPR2P25090 351 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 LMO1P25800 156 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 AKT2P31751 481 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 TMEM33P57088 247 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 SUPT4H1P63272 117 aaKnown RBP10.6□□□□□ -0.71
TP53-220ENST00000610623 SPOCK1Q08629 439 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 DEFB134Q4QY38 66 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 SLC18B1Q6NT16 456 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 KCTD18Q6PI47 426 aaPredicted RBP10.6□□□□□ -0.71
TP53-220ENST00000610623 UNQ6494/PRO21346Q6UXR6 183 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 SPNS3Q6ZMD2 512 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 PEG10Q86TG7 708 aaKnown RBP10.6□□□□□ -0.71
TP53-220ENST00000610623 CATSPERDQ86XM0 798 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 TGIF2LXQ8IUE1 241 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 OR4D6Q8NGJ1 314 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 OR51A2Q8NGJ7 313 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 CTHRC1Q96CG8 243 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 NTNG2Q96CW9 530 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 TGM7Q96PF1 710 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 MRPL37Q9BZE1 423 aaKnown RBP10.6□□□□□ -0.71
TP53-220ENST00000610623 GPR61Q9BZJ8 451 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 GSKIPQ9P0R6 139 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 TBC1D29Q9UFV1 150 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 HHLA2Q9UM44 414 aa10.6□□□□□ -0.71
TP53-220ENST00000610623 IGKV1D-42A0A075B6H8 117 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 CTSVO60911 334 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 SOD3P08294 240 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 PNMTP11086 282 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 ZNF708P17019 499 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 LTBRP36941 435 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 CAMLGP49069 296 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 NUTF2P61970 127 aaKnown RBP10.59□□□□□ -0.71
TP53-220ENST00000610623 SLC35A1P78382 337 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 Q7L0L9 218 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 RNF44Q7L0R7 432 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 C10orf53Q8N6V4 93 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 SMRP1Q8NCR6 262 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 BEND2Q8NDZ0 799 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 CMBLQ96DG6 245 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 NOL4LQ96MY1 436 aaPredicted RBP10.59□□□□□ -0.71
TP53-220ENST00000610623 LYRM4Q9HD34 91 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 SLC2A4RGQ9NR83 387 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 C19orf12Q9NSK7 152 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 RHBDD3Q9Y3P4 386 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 ATG2BQ96BY7 2078 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 SNRNP200O75643 2136 aaKnown RBP10.59□□□□□ -0.71
TP53-220ENST00000610623 LRP4O75096 1905 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 H7C1C5 153 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 FGF17O60258 216 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 ASAH2BP0C7U1 165 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 LCN6P62502 163 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 BTG2P78543 158 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 PSG6Q00889 435 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 NHLH2Q02577 135 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 SPEM2Q0P670 501 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 FAM53BQ14153 422 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 KIR2DS3Q14952 304 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 ELOBQ15370 118 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 ZNHIT3Q15649 155 aaPredicted RBP10.59□□□□□ -0.71
TP53-220ENST00000610623 TTLL10Q6ZVT0 673 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 CSNK1A1LQ8N752 337 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 SUMF2Q8NBJ7 301 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 OR13C3Q8NGS6 347 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 PPP1R14AQ96A00 147 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 BMFQ96LC9 184 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 TSPAN32Q96QS1 320 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 SOX7Q9BT81 388 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 LMF2Q9BU23 707 aaKnown RBP10.59□□□□□ -0.71
TP53-220ENST00000610623 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 PTGES2Q9H7Z7 377 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 PLEKHA2Q9HB19 425 aa10.59□□□□□ -0.71
TP53-220ENST00000610623 MMP25Q9NPA2 562 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms