RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 NKAIN3Q8N8D7 197 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 CDC6Q99741 560 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 DZANK1Q9NVP4 752 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 MEX3AA1L020 520 aaKnown RBP18.04■□□□□ 0.48
SSBP3-216ENST00000610401 CCDC85CA6NKD9 419 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 CDC14BO60729 498 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 SNAPINO95295 136 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 FAHP16930 419 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 FSTP19883 344 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 OR2B8PP59922 312 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 DNM1P34Q6PK57 102 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 HOGA1Q86XE5 327 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 OR1N1Q8NGS0 311 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 THRSPQ92748 146 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 SERINC1Q9NRX5 453 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 PCDHGA1Q9Y5H4 931 aa18.04■□□□□ 0.48
SSBP3-216ENST00000610401 TLCD2A6NGC4 264 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 TMEM127O75204 238 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 PTGFRP43088 359 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 NOVA1P51513 510 aaKnown RBP18.03■□□□□ 0.48
SSBP3-216ENST00000610401 MYBPHQ13203 477 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 Q6ZRG5 221 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 PPP1R3BQ86XI6 285 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 RNF133Q8WVZ7 376 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 BSCL2Q96G97 398 aaPredicted RBP18.03■□□□□ 0.48
SSBP3-216ENST00000610401 A0A1W2PPC4 97 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 EFNA2O43921 213 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 HIST1H1DP16402 221 aaKnown RBP18.03■□□□□ 0.48
SSBP3-216ENST00000610401 DRD1P21728 446 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 MST1LQ2TV78 715 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 ZDHHC22Q8N966 263 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 KCNK17Q96T54 332 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 NRIP2Q9BQI9 281 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 CHRDQ9H2X0 955 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 RCL1Q9Y2P8 373 aaKnown RBP18.03■□□□□ 0.48
SSBP3-216ENST00000610401 B3GALT1Q9Y5Z6 326 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 LHFPL6Q9Y693 200 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 RNASEK-C17orf49H0YIS7 233 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 NXPH3O95157 252 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 IL2RAP01589 272 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 ARG1P05089 322 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 FAM157CP0CG43 387 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 RNF4P78317 190 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 CHRFAM7AQ494W8 412 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 AVPI1Q5T686 147 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 PHYHIPLQ96FC7 376 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 ZFP57Q9NU63 452 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 LPAR3Q9UBY5 353 aa18.03■□□□□ 0.48
SSBP3-216ENST00000610401 VSTM2BA6NLU5 285 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 FTCDNL1E5RQL4 147 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 TXNL1O43396 289 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 S100A6P06703 90 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 DBHP09172 617 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 PJVKQ0ZLH3 352 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 DTX1Q86Y01 620 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 JSRP1Q96MG2 331 aaPredicted RBP18.02■□□□□ 0.48
SSBP3-216ENST00000610401 RTBDNQ9BSG5 229 aaPredicted RBP18.02■□□□□ 0.48
SSBP3-216ENST00000610401 EIF5A2Q9GZV4 153 aaKnown RBP18.02■□□□□ 0.48
SSBP3-216ENST00000610401 MMP17Q9ULZ9 603 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 EIF3GO75821 320 aaKnown RBP eCLIP18.02■□□□□ 0.48
SSBP3-216ENST00000610401 CX3CR1P49238 355 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 ACY1Q03154 408 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 ZNF528Q3MIS6 628 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 IP6K3Q96PC2 410 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 WDR77Q9BQA1 342 aaPredicted RBP18.02■□□□□ 0.48
SSBP3-216ENST00000610401 FANCFQ9NPI8 374 aa18.02■□□□□ 0.48
SSBP3-216ENST00000610401 RAB19A4D1S5 217 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 SGCEO43556 437 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 MELTFP08582 738 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 POU2F2P09086 479 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 DAP3P51398 398 aaKnown RBP18.01■□□□□ 0.47
SSBP3-216ENST00000610401 QRFPP83859 136 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 OR5T2Q8NGG2 359 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 GPHA2Q96T91 129 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 S100A13Q99584 98 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 NAA11Q9BSU3 229 aaPredicted RBP18.01■□□□□ 0.47
SSBP3-216ENST00000610401 CHST11Q9NPF2 352 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 FGF21Q9NSA1 209 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 FCGR2AP12318 317 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 PNLIPP16233 465 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 RFC3P40938 356 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 TMEM176BQ3YBM2 270 aaPredicted RBP18.01■□□□□ 0.47
SSBP3-216ENST00000610401 PHLDA2Q53GA4 152 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.01■□□□□ 0.47
SSBP3-216ENST00000610401 CD300LFQ8TDQ1 290 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 SFT2D1Q8WV19 159 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 CCNL2Q96S94 520 aaPredicted RBP18.01■□□□□ 0.47
SSBP3-216ENST00000610401 BIN3Q9NQY0 253 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 GPR132Q9UNW8 380 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 A0A1W2PPE3 182 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 MASP2O00187 686 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 BPNT1O95861 308 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 QDPRP09417 244 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 LAP3P28838 519 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 MMP16P51512 607 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 CFHR1Q03591 330 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 DHRS11Q6UWP2 260 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 OR5AS1Q8N127 324 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 HSD17B11Q8NBQ5 300 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 SLC38A9Q8NBW4 561 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms