RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 S100A13Q99584 98 aa10.47□□□□□ -0.73
USP6NL-206ENST00000609853 SOX7Q9BT81 388 aa10.47□□□□□ -0.73
USP6NL-206ENST00000609853 TMPRSS13Q9BYE2 586 aa10.47□□□□□ -0.73
USP6NL-206ENST00000609853 TTTY12Q9BZ98 90 aa10.47□□□□□ -0.73
USP6NL-206ENST00000609853 SELENOIQ9C0D9 397 aa10.47□□□□□ -0.73
USP6NL-206ENST00000609853 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.47□□□□□ -0.732e-6■■□□□ 13.9
USP6NL-206ENST00000609853 MCTS1Q9ULC4 181 aaKnown RBP10.47□□□□□ -0.73
USP6NL-206ENST00000609853 PIGLQ9Y2B2 252 aa10.47□□□□□ -0.73
USP6NL-206ENST00000609853 WDFY4Q6ZS81 3184 aa10.46□□□□□ -0.73
USP6NL-206ENST00000609853 WIPF3A6NGB9 483 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 E9PLN8 166 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 H3BUI4 141 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 RPL36A-HNRNPH2H7BZ11 118 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 AKR7A2O43488 359 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 MRPL33O75394 65 aaKnown RBP10.46□□□□□ -0.74
USP6NL-206ENST00000609853 MPIG6BO95866 241 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 TPOP07202 933 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 HIST1H1DP16402 221 aaKnown RBP10.46□□□□□ -0.74
USP6NL-206ENST00000609853 ZNF708P17019 499 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 NAT1P18440 290 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 NTF4P34130 210 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 OR3A4PP47883 348 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 CLDN18P56856 261 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 GNG2P59768 71 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 PPA1Q15181 289 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 CSRP2Q16527 193 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 CEACAM16Q2WEN9 425 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 PIP4P1Q86T03 277 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 GALNT16Q8N428 558 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 IL22RA1Q8N6P7 574 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 ZDHHC22Q8N966 263 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 OR11H4Q8NGC9 324 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 SGK3Q96BR1 496 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 ZNF775Q96BV0 537 aaPredicted RBP10.46□□□□□ -0.74
USP6NL-206ENST00000609853 TINAGL1Q9GZM7 467 aaPredicted RBP10.46□□□□□ -0.74
USP6NL-206ENST00000609853 ZMAT3Q9HA38 289 aaKnown RBP10.46□□□□□ -0.74
USP6NL-206ENST00000609853 ANAPC10Q9UM13 185 aa10.46□□□□□ -0.74
USP6NL-206ENST00000609853 NOSIPQ9Y314 301 aaKnown RBP10.46□□□□□ -0.74
USP6NL-206ENST00000609853 OR14I1A6ND48 311 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 ZNF724A8MTY0 619 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 M0QYG6 137 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 NME2P1O60361 137 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 CA11O75493 328 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 CRTAPO75718 401 aaPredicted RBP10.45□□□□□ -0.74
USP6NL-206ENST00000609853 ACTL6AO96019 429 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 SP1P08047 785 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 ZNF32P17041 273 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 NME2P22392 152 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 PRKACBP22694 351 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 RRADP55042 308 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 SOX8P57073 446 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 SNRPD2P62316 118 aaKnown RBP10.45□□□□□ -0.74
USP6NL-206ENST00000609853 RPS27AP62979 156 aaKnown RBP10.45□□□□□ -0.74
USP6NL-206ENST00000609853 GK2Q14410 553 aaPredicted RBP10.45□□□□□ -0.74
USP6NL-206ENST00000609853 CNN3Q15417 329 aaKnown RBP10.45□□□□□ -0.74
USP6NL-206ENST00000609853 UBE2V2Q15819 145 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 C4orf46Q504U0 113 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 CLVS2Q5SYC1 327 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 FAHD2BQ6P2I3 314 aaPredicted RBP10.45□□□□□ -0.74
USP6NL-206ENST00000609853 ZNF100Q8IYN0 542 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 OR2AK2Q8NG84 335 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 TNFAIP8L1Q8WVP5 186 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 FAHD2AQ96GK7 314 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 TECTBQ96PL2 329 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 ALKBH3Q96Q83 286 aaPredicted RBP10.45□□□□□ -0.74
USP6NL-206ENST00000609853 OCSTAMPQ9BR26 566 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 OR2H1Q9GZK4 316 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 ACKR4Q9NPB9 350 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 PIPOXQ9P0Z9 390 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 IL17BQ9UHF5 180 aa10.45□□□□□ -0.74
USP6NL-206ENST00000609853 LRP3O75074 770 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 F10P00742 488 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 DBHP09172 617 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 OR4E1P0C645 316 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 B4GALT1P15291 398 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 CD46P15529 392 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 GNB3P16520 340 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 FAHP16930 419 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 CXADRP78310 365 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 PSG4Q00888 419 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 PLGLB1Q02325 96 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 IKZF1Q13422 519 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 RNPS1Q15287 305 aaKnown RBP10.44□□□□□ -0.74
USP6NL-206ENST00000609853 ZNF774Q6NX45 483 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 MUC20Q8N307 709 aaPredicted RBP10.44□□□□□ -0.74
USP6NL-206ENST00000609853 TMEM251Q8N6I4 163 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 SUMF1Q8NBK3 374 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 UXS1Q8NBZ7 420 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 MDS2Q8NDY4 140 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 TMEM104Q8NE00 496 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 ABHD3Q8WU67 409 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 CMBLQ96DG6 245 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 REEP6Q96HR9 211 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 ZNF845Q96IR2 970 aaPredicted RBP10.44□□□□□ -0.74
USP6NL-206ENST00000609853 SPACA5Q96QH8 159 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 SLC6A7Q99884 636 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 TM2D1Q9BX74 207 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 POFUT1Q9H488 388 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 BCO1Q9HAY6 547 aa10.44□□□□□ -0.74
USP6NL-206ENST00000609853 EIF3KQ9UBQ5 218 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms