RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ADGRL4Q9HBW9 690 aa10.25□□□□□ -0.77
CTSA-210ENST00000606000 SMURF1Q9HCE7 757 aa10.25□□□□□ -0.77
CTSA-210ENST00000606000 FAM206AQ9NX38 181 aa10.25□□□□□ -0.77
CTSA-210ENST00000606000 DUX4Q9UBX2 424 aa10.25□□□□□ -0.77
CTSA-210ENST00000606000 MIOXQ9UGB7 285 aa10.25□□□□□ -0.77
CTSA-210ENST00000606000 NOP16Q9Y3C1 178 aaKnown RBP10.25□□□□□ -0.77
CTSA-210ENST00000606000 SOX21Q9Y651 276 aaPredicted RBP10.25□□□□□ -0.77
CTSA-210ENST00000606000 AUP1Q9Y679 476 aa10.25□□□□□ -0.77
CTSA-210ENST00000606000 IGHV2-70DA0A0C4DH43 119 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.24□□□□□ -0.77
CTSA-210ENST00000606000 ERICH4A6NGS2 130 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 C22orf46C9J442 243 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 ANKRD65E5RJM6 399 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 H3BNX3 289 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 LGALS8O00214 317 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 APOL3O95236 402 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 APOC1P02654 83 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 GYPAP02724 150 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 FCGR1AP12314 374 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 DDOSTP39656 456 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 PRDX4Q13162 271 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 ZSCAN26Q16670 478 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 ARMCX4Q5H9R4 360 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 NXNL2Q5VZ03 156 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 WDR25Q64LD2 544 aaPredicted RBP10.24□□□□□ -0.77
CTSA-210ENST00000606000 MEPCEQ7L2J0 689 aaKnown RBP10.24□□□□□ -0.77
CTSA-210ENST00000606000 SSX6Q7RTT6 188 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 FAM90A1Q86YD7 464 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 BCL6BQ8N143 479 aaPredicted RBP10.24□□□□□ -0.77
CTSA-210ENST00000606000 FGFRL1Q8N441 504 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 OR1M1Q8NGA1 313 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 LRRC29Q8WV35 223 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 HPSE2Q8WWQ2 592 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 ITPKCQ96DU7 683 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 TECTBQ96PL2 329 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 OR8B4Q96RC9 309 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 PKP2Q99959 881 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 RASSF4Q9H2L5 321 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 SP140LQ9H930 580 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 ESM1Q9NQ30 184 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 IKZF2Q9UKS7 526 aa10.24□□□□□ -0.77
CTSA-210ENST00000606000 OOEPA6NGQ2 149 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 ZNF850A8MQ14 1090 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.23□□□□□ -0.77
CTSA-210ENST00000606000 TNFRSF13BO14836 293 aaPredicted RBP10.23□□□□□ -0.77
CTSA-210ENST00000606000 SRSF10O75494 262 aaKnown RBP10.23□□□□□ -0.77
CTSA-210ENST00000606000 FSTL3O95633 263 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 TFF1P04155 84 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 IGHV4-38-2P0DP08 117 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 GNALP38405 381 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 PSMB10P40306 273 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 GMFBP60983 142 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 CXCR4P61073 352 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 PAX8Q06710 450 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 WDR82Q6UXN9 313 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 NLRC3Q7RTR2 1065 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 SLC35F2Q8IXU6 374 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 SPERTQ8NA61 448 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 PIGCQ92535 297 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 RPL3LQ92901 407 aaKnown RBP10.23□□□□□ -0.77
CTSA-210ENST00000606000 CENPNQ96H22 339 aaPredicted RBP10.23□□□□□ -0.77
CTSA-210ENST00000606000 TBX5Q99593 518 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 APOL4Q9BPW4 351 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 MRI1Q9BV20 369 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 OSBPL10Q9BXB5 764 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 GABARAPL3Q9BY60 117 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 PRRG3Q9BZD7 231 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 RGCCQ9H4X1 137 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 NIPAL2Q9H841 368 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 C14orf119Q9NWQ9 140 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 CLN8Q9UBY8 286 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 ZNF69Q9UC07 566 aa10.23□□□□□ -0.77
CTSA-210ENST00000606000 TRAV40A0A0B4J280 105 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 TMEM269A0A1B0GVZ9 245 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 CDIPTO14735 213 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 ADAM20O43506 726 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 LHBP01229 141 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 CFL1P23528 166 aaKnown RBP10.22□□□□□ -0.77
CTSA-210ENST00000606000 HILS1P60008 231 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 ACTR3P61158 418 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 ROM1Q03395 351 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 CEP78Q5JTW2 689 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 KCTD18Q6PI47 426 aaPredicted RBP10.22□□□□□ -0.77
CTSA-210ENST00000606000 ZNF679Q8IYX0 411 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 BPIFB2Q8N4F0 458 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 PLPP7Q8NBV4 271 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 CSNK2A3Q8NEV1 391 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 OR51G2Q8NGK0 314 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 OR51E1Q8TCB6 317 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 ZNF418Q8TF45 676 aaPredicted RBP10.22□□□□□ -0.77
CTSA-210ENST00000606000 RAB40AQ8WXH6 277 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 OR5P3Q8WZ94 311 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 UBE2FQ969M7 185 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 FAM71F1Q96KD3 344 aaPredicted RBP10.22□□□□□ -0.77
CTSA-210ENST00000606000 ZNF48Q96MX3 618 aaPredicted RBP10.22□□□□□ -0.77
CTSA-210ENST00000606000 NUDT16L1Q9BRJ7 211 aaKnown RBP10.22□□□□□ -0.77
CTSA-210ENST00000606000 MROQ9BYG7 248 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 PBOV1Q9GZY1 135 aa10.22□□□□□ -0.77
CTSA-210ENST00000606000 MDFIC2A0A1B0GVS7 189 aa10.21□□□□□ -0.77
CTSA-210ENST00000606000 SLC22A31A6NKX4 558 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms