RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 POC1AQ8NBT0 407 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM104Q8NE00 496 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 SEMA6DQ8NFY4 1073 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR5T1Q8NG75 326 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR51A2Q8NGJ7 313 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR13C2Q8NGS9 318 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR2A12Q8NGT7 310 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR8U1Q8NH10 309 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 RNF128Q8TEB7 428 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 THAP3Q8WTV1 239 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 Q8WTZ3 238 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 CA5BP1Q8WTZ4 195 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 ORAOV1Q8WV07 137 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM239Q8WW34 195 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 AQP3Q92482 292 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 RGP1Q92546 391 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 FRZBQ92765 325 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 CDS1Q92903 461 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 MRGPRFQ96AM1 343 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 TVP23CQ96ET8 276 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 ALG14Q96F25 216 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC41A2Q96JW4 573 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 ADAD1Q96M93 576 aaKnown RBP3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 AMDHD1Q96NU7 426 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 CNN2Q99439 309 aaKnown RBP3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 TBX5Q99593 518 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 MIEN1Q9BRT3 115 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF350Q9GZX5 532 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 LINC00597Q9H2U6 94 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 METTL8Q9H825 291 aaKnown RBP3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 PELI2Q9HAT8 420 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 TXNRD2Q9NNW7 524 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 GLRX2Q9NS18 164 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC23A2Q9UGH3 650 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 SERGEFQ9UGK8 458 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 CHRNA9Q9UGM1 479 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 MSRAQ9UJ68 235 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRG3Q9Y2Y8 225 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 MEMO1Q9Y316 297 aa3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 MRPS23Q9Y3D9 190 aaKnown RBP3.6□□□□□ -1.83
HMGB1P50-201ENST00000605814 LOC100509620A0A075B734 347 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 BORCS7-ASMTA0A0B4J1R7 106 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TRAV1-1A0A0B4J248 108 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TRAV39A0A0B4J263 110 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 A0A1W2PPK0 400 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 C5orf51A6NDU8 294 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 RBFOX3A6NFN3 312 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 MSGN1A6NI15 193 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 CPSF4LA6NMK7 179 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 EEF1E1-BLOC1S5C9J1V9 151 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 H3BQ15 152 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 CLDN34H7C241 214 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 PEX12O00623 359 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 PLPP1O14494 284 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 CNMDO75829 334 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TNFSF13O75888 250 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 NXPH2O95156 264 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TRGC2P03986 189 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OPN1MWP04001 364 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 DCNP07585 359 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 IL6RP08887 468 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 CST2P09228 141 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 QDPRP09417 244 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ELFN1P0C7U0 828 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMIGD3P0DMS9 266 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OPN1MW2P0DN77 364 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OPN1MW3P0DN78 364 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 PTHLHP12272 177 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM11P17152 192 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 IGFBP3P17936 291 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 RPS4Y1P22090 263 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 G0S2P27469 103 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 CD82P27701 267 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 RPL12P30050 165 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR10J1P30954 320 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 BRS3P32247 399 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 PPM1AP35813 382 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 RPL4P36578 427 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TAGLN2P37802 199 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 AKR1C3P42330 323 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 P2RY1P47900 373 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 SPINT3P49223 89 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 PAX5Q02548 391 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF117Q03924 483 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 RASGEF1BQ0VAM2 473 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 FHL1Q13642 323 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 RAB11BQ15907 218 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ARHGAP11BQ3KRB8 267 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF260Q3ZCT1 412 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ACSF3Q4G176 576 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF658BQ4V348 819 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF506Q5JVG8 444 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 VAX1Q5SQQ9 334 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 COL5A1-AS1Q5SY13 56 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 GFI1BQ5VTD9 330 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 KHDRBS2Q5VWX1 349 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 DPY19L2P2Q6ZN68 376 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 MTSS1LQ765P7 747 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC16A9Q7RTY1 509 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms