RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TMEM202A6NGA9 273 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 HSBP1O75506 76 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 CNIH1O95406 144 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 GJA4P35212 333 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PRTGQ2VWP7 1150 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 C1QTNF3Q9BXJ4 246 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 CTSFQ9UBX1 484 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 M0R082 166 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 UQCRFS1P47985 274 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 DMRTA1Q5VZB9 504 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 LEMD1Q68G75 181 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PLXDC2Q6UX71 529 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 NAXDQ8IW45 347 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SLC39A7Q92504 469 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 TWSG1Q9GZX9 223 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SOD1P00441 154 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SLC25A4P12235 298 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PRSS35Q8N3Z0 413 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 GNPNAT1Q96EK6 184 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 CASP8AP2Q9UKL3 1982 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 DNAJC25-GNG10A0A024R161 153 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 LINC00862A6NCI5 91 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 DEGS1O15121 323 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SPINT2O43291 252 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 CST7O76096 145 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PIPP12273 146 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 RTN4IP1Q8WWV3 396 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 LCORQ96JN0 433 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SLC46A1Q96NT5 459 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PPP1R3CQ9UQK1 317 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 FCN1O00602 326 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 CD14P08571 375 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 GNB1P62873 340 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 RBPJQ06330 500 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 AGBL5Q8NDL9 886 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 OR10C1Q96KK4 312 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SLC22A12Q96S37 553 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 TMEM38AQ9H6F2 299 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PRSS16Q9NQE7 514 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 DUSP13Q9UII6 198 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 OR2J3O76001 311 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SLCO2B1O94956 709 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 OLFM2O95897 454 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 COMPP49747 757 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PKDCCQ504Y2 493 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 NSUN5P2Q63ZY6 315 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 WDR5BQ86VZ2 330 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 ARRDC3Q96B67 414 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 STACQ99469 402 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 AMDHD2Q9Y303 409 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 K7ESM1 405 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 LIPNQ5VXI9 398 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PLPP6Q8IY26 295 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 GPR32P1Q8NGA4 272 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 VN1R17PQ8TDU5 208 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 A6NDN8 102 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 C5orf52A6NGY3 159 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SUCLG1P53597 346 aaKnown RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 ZNF468Q5VIY5 522 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 HSD17B13Q7Z5P4 300 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 DTWD2Q8NBA8 298 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 OR5A2Q8NGI9 324 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 PTP4A1Q93096 173 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 NMES1Q9C002 83 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 ACER3Q9NUN7 267 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 SLC5A10A0PJK1 596 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 FAM221AA4D161 298 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 IGHV3-9P01782 118 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 GRPP07492 148 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 EIF1P41567 113 aaKnown RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 C17orf99Q6UX52 265 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 DCBLD2Q96PD2 775 aa7.89□□□□□ -1.15
CSMD1-216ENST00000602557 DNMT3BQ9UBC3 853 aaKnown RBP7.89□□□□□ -1.15
CSMD1-216ENST00000602557 NKX6-3A6NJ46 265 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 TMEM189-UBE2V1I3L0A0 370 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 CXCL3P19876 107 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 LGALSLQ3ZCW2 172 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-216ENST00000602557 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 ALKAL1Q6UXT8 129 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 Q6ZSR9 355 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 MRPL43Q8N983 215 aaKnown RBP7.88□□□□□ -1.15
CSMD1-216ENST00000602557 SMIM4Q8WVI0 70 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 WSB1Q9Y6I7 421 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 TMEM218A2RU14 115 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 LIM2P55344 173 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 PFN3P60673 137 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 C17orf67Q0P5P2 114 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 OTPQ5XKR4 325 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 KMT5CQ86Y97 462 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 ATOH1Q92858 354 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-216ENST00000602557 NDUFB7P17568 137 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 GPM6AP51674 278 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 AGFG1P52594 562 aaKnown RBP7.88□□□□□ -1.15
CSMD1-216ENST00000602557 CCSMST1Q4G0I0 132 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 H2BFWTQ7Z2G1 175 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 ANGPTL5Q86XS5 388 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 GALNT16Q8N428 558 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 OR4S1Q8NGB4 309 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 LRRC30A6NM36 301 aa7.88□□□□□ -1.15
CSMD1-216ENST00000602557 TNFRSF10CO14798 259 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms