RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RIIAD1A6NNX1 92 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.84□□□□□ -0.67
RPS28-204ENST00000602140 IFNGP01579 166 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 ZNF3P17036 446 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 ATP6V1B2P21281 511 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 MAGEA2P43356 314 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 IER3P46695 156 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 GSK3AP49840 483 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 BLVRAP53004 296 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 ZNF121P58317 390 aaPredicted RBP10.84□□□□□ -0.67
RPS28-204ENST00000602140 GFOD2Q3B7J2 385 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 KLHL12Q53G59 568 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 LINC01590Q5TEZ4 76 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 RHOUQ7L0Q8 258 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 PRSS45Q7RTY3 260 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 SLC36A1Q7Z2H8 476 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 ERI1Q8IV48 349 aaKnown RBP10.84□□□□□ -0.67
RPS28-204ENST00000602140 FAM216BQ8N7L0 139 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 OR6N2Q8NGY6 317 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 LINC01006Q8NI28 216 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 ABHD6Q9BV23 337 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 SP140LQ9H930 580 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 MED20Q9H944 212 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 BRD7Q9NPI1 651 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 NDE1Q9NXR1 346 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 VNN3Q9NY84 501 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 ZNF319Q9P2F9 582 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 ONECUT1Q9UBC0 465 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 FAM96BQ9Y3D0 163 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 RHBDD3Q9Y3P4 386 aa10.84□□□□□ -0.67
RPS28-204ENST00000602140 FAM183AA6NL82 134 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 M0QZ24 198 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 ACOT8O14734 319 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 CDIPTO14735 213 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 TIMM23O14925 209 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 NDUFB3O43676 98 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 TIPRLO75663 272 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 APOC1P02654 83 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 CFL1P23528 166 aaKnown RBP10.83□□□□□ -0.68
RPS28-204ENST00000602140 GNALP38405 381 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 NAA10P41227 235 aaPredicted RBP10.83□□□□□ -0.68
RPS28-204ENST00000602140 GMFBP60983 142 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 PRB3Q04118 309 aaPredicted RBP10.83□□□□□ -0.68
RPS28-204ENST00000602140 IKZF1Q13422 519 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 MICAQ29983 383 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 OR5T2Q8NGG2 359 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 OR52H1Q8NGJ2 320 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 RNF133Q8WVZ7 376 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 OTULINQ96BN8 352 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 INTS14Q96SY0 518 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 AMELYQ99218 206 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 PAPOLGQ9BWT3 736 aaKnown RBP10.83□□□□□ -0.68
RPS28-204ENST00000602140 DGCR6LQ9BY27 220 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 OR10A2Q9H208 303 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 SEMA6AQ9H2E6 1030 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 DPAGT1Q9H3H5 408 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 REEP1Q9H902 201 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 CMC2Q9NRP2 79 aa10.83□□□□□ -0.68
RPS28-204ENST00000602140 SAMHD1Q9Y3Z3 626 aaKnown RBP10.83□□□□□ -0.68
RPS28-204ENST00000602140 TCRBV5S2A0A599 114 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 GPR37O15354 613 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 H2BFMP0C1H6 154 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 AMY2BP19961 511 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 GSTT1P30711 240 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 OPRL1P41146 370 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 ASPHD2Q6ICH7 369 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 OR2T5Q6IEZ7 315 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 GDPGP1Q6ZNW5 385 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 CMTM4Q8IZR5 234 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 GALNT4Q8N4A0 578 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 IQCF1Q8N6M8 205 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 CSNK2A3Q8NEV1 391 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 OR2T29Q8NH02 315 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 C12orf43Q96C57 262 aaKnown RBP10.82□□□□□ -0.68
RPS28-204ENST00000602140 ITPKCQ96DU7 683 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 PGAM5Q96HS1 289 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 MICU1Q9BPX6 476 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 TLNRD1Q9H1K6 362 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 MMP27Q9H306 513 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 MAGIXQ9H6Y5 334 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 SIRT7Q9NRC8 400 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 SNTG1Q9NSN8 517 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 DNAJB11Q9UBS4 358 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 PRPF19Q9UMS4 504 aaKnown RBP10.82□□□□□ -0.68
RPS28-204ENST00000602140 ARL2BPQ9Y2Y0 163 aa10.82□□□□□ -0.68
RPS28-204ENST00000602140 CMYA5Q8N3K9 4069 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 A0A1W2PRD5 423 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 A0A1W2PRF3 423 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 A0A1W2PRM7 423 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 ANXA2P2A6NMY6 339 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 RNASEK-C17orf49H0YIS7 233 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 DCTN3O75935 186 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 CLPXO76031 633 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 GLCEO94923 617 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 FBP1P09467 338 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 SELLP14151 372 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 TGM4P49221 684 aa10.81□□□□□ -0.68
RPS28-204ENST00000602140 DLX1P56177 255 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms