RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 OR5AS1Q8N127 324 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 PP6455Q8WZ26 134 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 TMEM106AQ96A25 262 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 MARVELD3Q96A59 401 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 FGGYQ96C11 551 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 ADAT3Q96EY9 351 aaPredicted RBP12.26□□□□□ -0.45
UPF1-211ENST00000600868 DERL3Q96Q80 235 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 OR14A2Q96R54 314 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 SLC30A2Q9BRI3 323 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 SLC22A4Q9H015 551 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 UBTD1Q9HAC8 227 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 FBXO9Q9UK97 447 aaPredicted RBP12.26□□□□□ -0.45
UPF1-211ENST00000600868 STUB1Q9UNE7 303 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 RHBDD3Q9Y3P4 386 aa12.26□□□□□ -0.45
UPF1-211ENST00000600868 RAI1Q7Z5J4 1906 aaPredicted RBP12.26□□□□□ -0.45
UPF1-211ENST00000600868 A0A1W2PPW3 197 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 GABRPO00591 440 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 ZNF20P17024 532 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 GADD45AP24522 165 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 FGF9P31371 208 aaPredicted RBP12.25□□□□□ -0.45
UPF1-211ENST00000600868 MMP15P51511 669 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 BLMHQ13867 455 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 INSL4Q14641 139 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 CLVS2Q5SYC1 327 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 GDPGP1Q6ZNW5 385 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 UTS2BQ765I0 119 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 CEACAM19Q7Z692 300 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 TMEM200AQ86VY9 491 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 SERPINA12Q8IW75 414 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 BHLHE23Q8NDY6 225 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 OR13G1Q8NGZ3 307 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 FUNDC2Q9BWH2 189 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 PAPOLGQ9BWT3 736 aaKnown RBP12.25□□□□□ -0.45
UPF1-211ENST00000600868 CHST5Q9GZS9 411 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 OR51E2Q9H255 320 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 ABCB9Q9NP78 766 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 CBLN4Q9NTU7 201 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 TMEM100Q9NV29 134 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 MPC1Q9Y5U8 109 aa12.25□□□□□ -0.45
UPF1-211ENST00000600868 PLSCR5A0PG75 271 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 ANKRD61A6NGH8 418 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 A6NIN4 97 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 M0R233 179 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 PIN1P1O15428 100 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 GMDSO60547 372 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 GPX5O75715 221 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 ALX3O95076 343 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 NRASP01111 189 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 CD8AP01732 235 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 SOD3P08294 240 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 UCHL1P09936 223 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 GNALP38405 381 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 SNRPD2P62316 118 aaKnown RBP12.24□□□□□ -0.45
UPF1-211ENST00000600868 NKPD1Q17RQ9 610 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 DCHS2Q6V1P9 2916 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 C20orf204Q6ZNR8 217 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 Q6ZR03 302 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 SATL1Q86VE3 508 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 OR5D14Q8NGL3 314 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 UBASH3BQ8TF42 649 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 PIGCQ92535 297 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 TECTBQ96PL2 329 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 ZCCHC4Q9H5U6 513 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 MSL2Q9HCI7 577 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 NOX4Q9NPH5 578 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 SSR3Q9UNL2 185 aa12.24□□□□□ -0.45
UPF1-211ENST00000600868 NOP16Q9Y3C1 178 aaKnown RBP12.24□□□□□ -0.45
UPF1-211ENST00000600868 ZSCAN5BA6NJL1 495 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ZNF850A8MQ14 1090 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ARL6IP5O75915 188 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ADH4P08319 380 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 FSTP19883 344 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 CA6P23280 308 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ALDH3B1P43353 468 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ZNF81P51508 661 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 PRDX4Q13162 271 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ASPHD2Q6ICH7 369 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 C11orf71Q6IPW1 123 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ZNF529Q6P280 563 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ANKRD13BQ86YJ7 626 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ZDHHC23Q8IYP9 409 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 TRMT61AQ96FX7 289 aaKnown RBP12.23□□□□□ -0.45
UPF1-211ENST00000600868 DIRC2Q96SL1 478 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 TRAF4Q9BUZ4 470 aaPredicted RBP12.23□□□□□ -0.45
UPF1-211ENST00000600868 PPIL3Q9H2H8 161 aaKnown RBP12.23□□□□□ -0.45
UPF1-211ENST00000600868 MS4A5Q9H3V2 200 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 TXNL4BQ9NX01 149 aaKnown RBP12.23□□□□□ -0.45
UPF1-211ENST00000600868 CKLFQ9UBR5 152 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 ZDHHC8Q9ULC8 765 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 FOXJ3Q9UPW0 622 aa12.23□□□□□ -0.45
UPF1-211ENST00000600868 A0A1W2PPK0 400 aa12.22□□□□□ -0.45
UPF1-211ENST00000600868 ANXA2P2A6NMY6 339 aa12.22□□□□□ -0.45
UPF1-211ENST00000600868 MLNRO43193 412 aa12.22□□□□□ -0.45
UPF1-211ENST00000600868 AIREO43918 545 aa12.22□□□□□ -0.45
UPF1-211ENST00000600868 NAT2P11245 290 aa12.22□□□□□ -0.45
UPF1-211ENST00000600868 BMP4P12644 408 aa12.22□□□□□ -0.45
UPF1-211ENST00000600868 IGFBP3P17936 291 aaPredicted RBP12.22□□□□□ -0.45
UPF1-211ENST00000600868 PPOXP50336 477 aa12.22□□□□□ -0.45
UPF1-211ENST00000600868 OR8G1Q15617 311 aa12.22□□□□□ -0.45
UPF1-211ENST00000600868 UBE2V2Q15819 145 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms