RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	GCSAM	Q8N6F7	178 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	OR51F2	Q8NH61	342 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	PPP1R14A	Q96A00	147 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	APOL4	Q9BPW4	351 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	TMEM246	Q9BRR3	403 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	ADAT1	Q9BUB4	502 aa	Known RBP	7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	TMPRSS13	Q9BYE2	586 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	MRO	Q9BYG7	248 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	LPAR2	Q9HBW0	351 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	FAM118A	Q9NWS6	357 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	HIF1AN	Q9NWT6	349 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	DNAJC27	Q9NZQ0	273 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	EXOG	Q9Y2C4	368 aa	Known RBP	7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	RHBDD3	Q9Y3P4	386 aa		7.35	□□□□□ -1.23
SSBP4-208	ENST00000600628	GGT3P	A6NGU5	568 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	TRAPPC2L	H3BP13	241 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628		J3QLI3	93 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	PSMD9	O00233	223 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	CASQ2	O14958	399 aa	Predicted RBP	7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	WBP4	O75554	376 aa	Known RBP	7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	CYB5R3	P00387	301 aa	Predicted RBP	7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	MTNR1A	P48039	350 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	RIDA	P52758	137 aa	Known RBP	7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	SEC61A1	P61619	476 aa	Known RBP	7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZNF85	Q03923	595 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZNF154	Q13106	437 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	SNCB	Q16143	134 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZSCAN26	Q16670	478 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	CDON	Q4KMG0	1287 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	PRAMEF6	Q5VXH4	476 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	LIPN	Q5VXI9	398 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	WDR82	Q6UXN9	313 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	ZBTB49	Q6ZSB9	765 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	KRT77	Q7Z794	578 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	CATSPERD	Q86XM0	798 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	C1orf87	Q8N0U7	546 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	MUC20	Q8N307	709 aa	Predicted RBP	7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	SPIC	Q8N5J4	248 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	DEFB108B	Q8NET1	73 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	OR1M1	Q8NGA1	313 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	OR51G2	Q8NGK0	314 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	FAM81A	Q8TBF8	368 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	APH1B	Q8WW43	257 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	OR5P3	Q8WZ94	311 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	RORB	Q92753	470 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	DVL3	Q92997	716 aa	Predicted RBP	7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	RFK	Q969G6	155 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	PGAM5	Q96HS1	289 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	GAL3ST1	Q99999	423 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	JAM3	Q9BX67	310 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	PBOV1	Q9GZY1	135 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	MOB1A	Q9H8S9	216 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	RNPEPL1	Q9HAU8	725 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	ABCB9	Q9NP78	766 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	RNF7	Q9UBF6	113 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	LRCH1	Q9Y2L9	728 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	MPC1	Q9Y5U8	109 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628		R4GMQ9	66 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628		V9GYS6	101 aa		7.34	□□□□□ -1.23
SSBP4-208	ENST00000600628	DSCAML1	Q8TD84	2053 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	LOC100130705	A0A1B0GUX0	176 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	ERICH4	A6NGS2	130 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	ANKRD30BL	A7E2S9	258 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	SRRM5	B3KS81	715 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	MAGEB4	O15481	346 aa	Predicted RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	PHF1	O43189	567 aa	Predicted RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	TBX1	O43435	398 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	IGHA1	P01876	353 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	PPIAL4G	P0DN37	164 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	ZNF12	P17014	697 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	SRP14	P37108	136 aa	Known RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	MAP2K3	P46734	347 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	ADARB1	P78563	741 aa	Known RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	HOXA4	Q00056	320 aa	Predicted RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	PAX8	Q06710	450 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	C11orf91	Q3C1V1	193 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	ZNF829	Q3KNS6	432 aa	Predicted RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	CEACAM21	Q3KPI0	293 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	FAM201A	Q5SY85	155 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	ATPAF1	Q5TC12	328 aa	Predicted RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	FAHD2B	Q6P2I3	314 aa	Predicted RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	DCDC5	Q6ZRR9	648 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	KCTD20	Q7Z5Y7	419 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	PRSS35	Q8N3Z0	413 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	KLHL36	Q8N4N3	616 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	PACRGL	Q8N7B6	248 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	OR14K1	Q8NGZ2	314 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	SPATA3	Q8NHX4	192 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	OR51E1	Q8TCB6	317 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	TMEM158	Q8WZ71	300 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	FAHD2A	Q96GK7	314 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	FN3KRP	Q9HA64	309 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	BRD7	Q9NPI1	651 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	GPR84	Q9NQS5	396 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	C8orf4	Q9NR00	106 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	C14orf119	Q9NWQ9	140 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	H2AFY2	Q9P0M6	372 aa	Predicted RBP	7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	KAAG1	Q9UBP8	84 aa		7.33	□□□□□ -1.24
SSBP4-208	ENST00000600628	AASS	Q9UDR5	926 aa		7.33	□□□□□ -1.24

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