RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 UBE2NP61088 152 aaKnown RBP13.15□□□□□ -0.3
HIF3A-218ENST00000600383 CXADRP78310 365 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 GUCA2AQ02747 115 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 SNTB2Q13425 540 aaKnown RBP13.15□□□□□ -0.3
HIF3A-218ENST00000600383 GUSBP1Q15486 140 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 HACD4Q5VWC8 232 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 RSBN1Q5VWQ0 802 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-218ENST00000600383 CD163Q86VB7 1156 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 PNLDC1Q8NA58 520 aaKnown RBP13.15□□□□□ -0.3
HIF3A-218ENST00000600383 CCDC54Q8NEL0 328 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 AKAP1Q92667 903 aaKnown RBP eCLIP13.15□□□□□ -0.3
HIF3A-218ENST00000600383 C10orf35Q96D05 121 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 RNF170Q96K19 258 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 POM121L2Q96KW2 1035 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 ATPIF1Q9UII2 106 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 ING4Q9UNL4 249 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 MT-ND4P03905 459 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 ALDOBP05062 364 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 FAM87AP0C7U9 286 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 COX5BP10606 129 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 CAPZA1P52907 286 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 RAB25P57735 213 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 HLXQ14774 488 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-218ENST00000600383 SLC22A6Q4U2R8 563 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 COLCA1Q6ZS62 124 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 Q6ZSR3 168 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 SEM1Q6ZVN7 128 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 UTS2BQ765I0 119 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 ZNF554Q86TJ5 538 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 RPRMLQ8N4K4 120 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 CHST4Q8NCG5 386 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 OR6K3Q8NGY3 331 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 PIGCQ92535 297 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 NEURL2Q9BR09 285 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 C1QTNF6Q9BXI9 259 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 BANF2Q9H503 90 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 ELL3Q9HB65 397 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-218ENST00000600383 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
HIF3A-218ENST00000600383 INTS1Q8N201 2190 aaKnown RBP13.14□□□□□ -0.31
HIF3A-218ENST00000600383 hCG_38984A0A1B0GV85 526 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 A0A1W2PP11 408 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 NRASP01111 189 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 PRF1P14222 555 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 PRSS3P35030 304 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 PTGFRP43088 359 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 VEGFCP49767 419 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 MTCP1P56278 107 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 TMPRSS3P57727 454 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 MRPS10P82664 201 aaKnown RBP13.14□□□□□ -0.31
HIF3A-218ENST00000600383 CD300CQ08708 224 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 GK2Q14410 553 aaPredicted RBP13.14□□□□□ -0.31
HIF3A-218ENST00000600383 SF3B4Q15427 424 aaKnown RBP eCLIP13.14□□□□□ -0.31
HIF3A-218ENST00000600383 KRTCAP3Q53RY4 240 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 RTL6Q6ICC9 239 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 C1QL2Q7Z5L3 287 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 ZNF610Q8N9Z0 462 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 TMEM104Q8NE00 496 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 DUSP18Q8NEJ0 188 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 CMBLQ96DG6 245 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 S100A13Q99584 98 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 OPN3Q9H1Y3 402 aaPredicted RBP13.14□□□□□ -0.31
HIF3A-218ENST00000600383 ELF5Q9UKW6 265 aaPredicted RBP13.14□□□□□ -0.31
HIF3A-218ENST00000600383 STARD10Q9Y365 291 aa13.14□□□□□ -0.31
HIF3A-218ENST00000600383 CRTAPO75718 401 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-218ENST00000600383 RBBP9O75884 186 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 TOXO94900 526 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 MPIG6BO95866 241 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 PLATP00750 562 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 RAB6AP20340 208 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 GIFP27352 417 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 QRFPP83859 136 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 MALLQ13021 153 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 KLF9Q13886 244 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-218ENST00000600383 CDH26Q8IXH8 852 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 NAXEQ8NCW5 288 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 SLC30A7Q8NEW0 376 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 TNFAIP8L1Q8WVP5 186 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 PTX4Q96A99 478 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 APOBEC3DQ96AK3 386 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-218ENST00000600383 PROCRQ9UNN8 238 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 FIGNL2A6NMB9 653 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 DHRS7CA6NNS2 312 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 TNFSF13O75888 250 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 SERPINA5P05154 406 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 CELA3BP08861 270 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 FAM157BP0CG42 384 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 SLC6A1P30531 599 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 HOXD11P31277 338 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-218ENST00000600383 CCR6P51684 374 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 GABRA6Q16445 453 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 CLVS2Q5SYC1 327 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 SFRP4Q6FHJ7 346 aaPredicted RBP13.13□□□□□ -0.31
HIF3A-218ENST00000600383 MRPL21Q7Z2W9 205 aaKnown RBP13.13□□□□□ -0.31
HIF3A-218ENST00000600383 DPPA2Q7Z7J5 298 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 OR10K1Q8NGX5 313 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 SSC4DQ8WTU2 575 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 HPS1Q92902 700 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 STARD4Q96DR4 205 aa13.13□□□□□ -0.31
HIF3A-218ENST00000600383 ZC3HAV1LQ96H79 300 aaKnown RBP13.13□□□□□ -0.31
HIF3A-218ENST00000600383 NICN1Q9BSH3 213 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms