RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 TMEM170AQ8WVE7 144 aa8.78□□□□□ -1
NFKB1-212ENST00000600343 AQP3Q92482 292 aa8.78□□□□□ -1
NFKB1-212ENST00000600343 ERGIC1Q969X5 290 aa8.78□□□□□ -1
NFKB1-212ENST00000600343 FAM71F1Q96KD3 344 aaPredicted RBP8.78□□□□□ -1
NFKB1-212ENST00000600343 ARHGDIGQ99819 225 aa8.78□□□□□ -1
NFKB1-212ENST00000600343 IL26Q9NPH9 171 aa8.78□□□□□ -1
NFKB1-212ENST00000600343 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.78□□□□□ -1
NFKB1-212ENST00000600343 SIRT3Q9NTG7 399 aaPredicted RBP8.78□□□□□ -1
NFKB1-212ENST00000600343 TRAV30A0A087WSZ9 112 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 ETV2O00321 342 aaPredicted RBP8.77□□□□□ -1
NFKB1-212ENST00000600343 DDNO94850 711 aaPredicted RBP8.77□□□□□ -1
NFKB1-212ENST00000600343 THY1P04216 161 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 ZNF708P17019 499 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 HOXD9P28356 352 aaPredicted RBP8.77□□□□□ -1
NFKB1-212ENST00000600343 HOXA11P31270 313 aaPredicted RBP8.77□□□□□ -1
NFKB1-212ENST00000600343 MESP2Q0VG99 397 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 FOXF1Q12946 379 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 TMEM128Q5BJH2 165 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 WDR25Q64LD2 544 aaPredicted RBP8.77□□□□□ -1
NFKB1-212ENST00000600343 FBXW12Q6X9E4 464 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 TMEM234Q8WY98 164 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 LOXL4Q96JB6 756 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 Q96M85 177 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 BCL2L10Q9HD36 194 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 MKKSQ9NPJ1 570 aaPredicted RBP8.77□□□□□ -1
NFKB1-212ENST00000600343 SLC2A9Q9NRM0 540 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 P4HTMQ9NXG6 502 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 LAMTOR2Q9Y2Q5 125 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 RNF115Q9Y4L5 304 aa8.77□□□□□ -1
NFKB1-212ENST00000600343 IGHV2OR16-5A0A0B4J2B6 119 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 A0A1B0GU03 582 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 GOSR1O95249 250 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CTSBP07858 339 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 GRPRP30550 384 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 FRKP42685 505 aaPredicted RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 KHKP50053 298 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 MPV17LQ2QL34 196 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CST9Q5W186 159 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 MCEMP1Q8IX19 187 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 EXD3Q8N9H8 876 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 MAGT1Q9H0U3 335 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 DMRT3Q9NQL9 472 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 C14orf166Q9Y224 244 aaKnown RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 FUT9Q9Y231 359 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 RCL1Q9Y2P8 373 aaKnown RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CASP8AP2Q9UKL3 1982 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 KNG1P01042 644 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CST9LP1Q5W188 147 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 AGTRAPQ6RW13 159 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CLEC18BQ6UXF7 455 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 SPRED2Q7Z698 418 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 WFDC8Q8IUA0 241 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 ARL14EPQ8N8R7 260 aaPredicted RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 OR4D5Q8NGN0 318 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 LIPHQ8WWY8 451 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 APH1AQ96BI3 265 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 PINX1Q96BK5 328 aaKnown RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 LYRM2Q9NU23 88 aaPredicted RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 ZCCHC3Q9NUD5 404 aaKnown RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CLEC18AA5D8T8 446 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 OR6A2O95222 327 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 SFT2D2O95562 160 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 HSPB1P04792 205 aaKnown RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 MMP9P14780 707 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 HRH1P35367 487 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 ARR3P36575 388 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 RAB28P51157 221 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 ARF6P62330 175 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CDK3Q00526 305 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 SPEM2Q0P670 501 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 AGERQ15109 404 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 ACOT6Q3I5F7 207 aaPredicted RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 TCEAL5Q5H9L2 206 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 ZNF468Q5VIY5 522 aaPredicted RBP8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CFAP52Q8N1V2 620 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 CLEC18CQ8NCF0 446 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 OR10S1Q8NGN2 331 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 PFN4Q8NHR9 129 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 RNF39Q9H2S5 420 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 TMEM9BQ9NQ34 198 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 GTF2A1LQ9UNN4 478 aa8.77□□□□□ -1.01
NFKB1-212ENST00000600343 SLC16A5O15375 505 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 MMP23AO75900 390 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 IRF1P10914 325 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 BMP5P22003 454 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 PMPCAQ10713 525 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 EFEMP1Q12805 493 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 SCGB2A2Q13296 93 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 OR51A7Q8NH64 312 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 OR14C36Q8NHC7 312 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 RNF128Q8TEB7 428 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 TMEM239Q8WW34 195 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 TMEM40Q8WWA1 233 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 CCDC74AQ96AQ1 378 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 REEP6Q96HR9 211 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 PRRX2Q99811 253 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 MEGF9Q9H1U4 602 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 OR6C3Q9NZP0 311 aa8.76□□□□□ -1.01
NFKB1-212ENST00000600343 LSM5Q9Y4Y9 91 aaKnown RBP8.76□□□□□ -1.01
NFKB1-212ENST00000600343 YIPF1Q9Y548 306 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms