RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 SGCDQ92629 289 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 YIPF5Q969M3 257 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 MEGF10Q96KG7 1140 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 Q96MF0 132 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 OR2V2Q96R30 315 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 PAPOLGQ9BWT3 736 aaKnown RBP16.4■□□□□ 0.22
UPF1-209ENST00000600310 CDCA4Q9BXL8 241 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 BABAM2Q9NXR7 383 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 V9GYS6 101 aa16.4■□□□□ 0.22
UPF1-209ENST00000600310 AKAP9Q99996 3911 aa16.39■□□□□ 0.22
UPF1-209ENST00000600310 IGHV1-69-2A0A0G2JMI3 117 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 DHRS7CA6NNS2 312 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 F5H5P2 479 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 SYT7O43581 403 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 TNFRSF1AP19438 455 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 COL8A2P25067 703 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 SRP9P49458 86 aaKnown RBP16.39■□□□□ 0.21
UPF1-209ENST00000600310 CCDC58Q4VC31 144 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 TMEM244Q5VVB8 128 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 RDH10Q8IZV5 341 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 CELF2-AS1Q8N7Q2 184 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 NANOGP1Q8N7R0 232 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 RPS4Y2Q8TD47 263 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 ITLN1Q8WWA0 313 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 GATAD2BQ8WXI9 593 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 FAM168AQ92567 244 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 ADAT1Q9BUB4 502 aaKnown RBP16.39■□□□□ 0.21
UPF1-209ENST00000600310 DLL4Q9NR61 685 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 ERVK-18Q9QC07 812 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 BLOC1S6Q9UL45 172 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 ERGIC3Q9Y282 383 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 MPC1Q9Y5U8 109 aa16.39■□□□□ 0.21
UPF1-209ENST00000600310 ZNF816-ZNF321PA0A0X1KG74 233 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 LOC107986453A0A1B0GWG9 222 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 LYNX1G3V0Z9 82 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 NDUFS8O00217 210 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 MYL12BO14950 172 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 CDC14BO60729 498 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 RP2O75695 350 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 LYNX1P0DP58 116 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 ACHEP22303 614 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 GNALP38405 381 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 CD200P41217 278 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 GTF2A1P52655 376 aaPredicted RBP16.38■□□□□ 0.21
UPF1-209ENST00000600310 MAB21L1Q13394 359 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 IRF3Q14653 427 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 RPL22L1Q6P5R6 122 aaKnown RBP16.38■□□□□ 0.21
UPF1-209ENST00000600310 C10orf105Q8TEF2 133 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 CHODLQ9H9P2 273 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 ABCB9Q9NP78 766 aa16.38■□□□□ 0.21
UPF1-209ENST00000600310 CELSR1Q9NYQ6 3014 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 IGHV4-30-2A0A087WSY4 118 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.37■□□□□ 0.21
UPF1-209ENST00000600310 TRBV2A0A0J9YWF9 115 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 TMEM212A6NML5 194 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 OGG1O15527 345 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 RGS10O43665 173 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 ZFPL1O95159 310 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 PTBP3O95758 552 aaKnown RBP16.37■□□□□ 0.21
UPF1-209ENST00000600310 LALBAP00709 142 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 FAHP16930 419 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 ZNF12P17014 697 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 GIFP27352 417 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 WNT4P56705 351 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 MZT1Q08AG7 82 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 PRDX4Q13162 271 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 CDK5R1Q15078 307 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 CARTPTQ16568 116 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 XAF1Q6GPH4 301 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 TGIF2LYQ8IUE0 185 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 ZNF676Q8N7Q3 588 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 OR8S1Q8NH09 359 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 PIGCQ92535 297 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 DVL3Q92997 716 aaPredicted RBP16.37■□□□□ 0.21
UPF1-209ENST00000600310 PPP1R3EQ9H7J1 279 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 TRIM36Q9NQ86 728 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 ENPP5Q9UJA9 477 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 PIGLQ9Y2B2 252 aa16.37■□□□□ 0.21
UPF1-209ENST00000600310 ANXA2P2A6NMY6 339 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 ZNF850A8MQ14 1090 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 RPSAP08865 295 aaKnown RBP16.36■□□□□ 0.21
UPF1-209ENST00000600310 GATA4P43694 442 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 TMEM33P57088 247 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 RIN1Q13671 783 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 HFEQ30201 348 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 TMEM42Q69YG0 159 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 PRSS48Q7RTY5 328 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 C10orf35Q96D05 121 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 ITPKCQ96DU7 683 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 MND1Q9BWT6 205 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 YTHDF1Q9BYJ9 559 aaKnown RBP16.36■□□□□ 0.21
UPF1-209ENST00000600310 COMMD4Q9H0A8 199 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 HHLA2Q9UM44 414 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 LRRC42Q9Y546 428 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 CACNG2Q9Y698 323 aa16.36■□□□□ 0.21
UPF1-209ENST00000600310 SIRT4Q9Y6E7 314 aaPredicted RBP16.36■□□□□ 0.21
UPF1-209ENST00000600310 TRIM64A6NGJ6 449 aa16.35■□□□□ 0.21
UPF1-209ENST00000600310 TRIM64BA6NI03 449 aa16.35■□□□□ 0.21
UPF1-209ENST00000600310 VWC2LB2RUY7 222 aa16.35■□□□□ 0.21
UPF1-209ENST00000600310 H3BSH0 61 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms