RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 OR1M1Q8NGA1 313 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 OR4F5Q8NH21 305 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 TAF15Q92804 592 aaKnown RBP eCLIP8.12□□□□□ -1.11
VRK3-216ENST00000599342 LHX4Q969G2 390 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 SGK3Q96BR1 496 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 CCT8L2Q96SF2 557 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 TBX15Q96SF7 602 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 FEVQ99581 238 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 MICU1Q9BPX6 476 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 CHID1Q9BWS9 393 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 TEX12Q9BXU0 123 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 SLITRK2Q9H156 845 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 PRDM13Q9H4Q3 707 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 ZNF556Q9HAH1 456 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 ABCB9Q9NP78 766 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 KAAG1Q9UBP8 84 aa8.12□□□□□ -1.11
VRK3-216ENST00000599342 IGHV1-69DA0A0B4J2H0 117 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 CENPVL3A0A0U1RRI6 287 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 A0A1B0GVI7 797 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 TNFRSF13BO14836 293 aaPredicted RBP8.11□□□□□ -1.11
VRK3-216ENST00000599342 E2F6O75461 281 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 LHBP01229 141 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 IGHV1-69P01742 117 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 HOXB6P17509 224 aaKnown RBP8.11□□□□□ -1.11
VRK3-216ENST00000599342 OPRL1P41146 370 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 GSK3AP49840 483 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 RAG2P55895 527 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 RPS7P62081 194 aaKnown RBP8.11□□□□□ -1.11
VRK3-216ENST00000599342 ARF6P62330 175 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 POU4F2Q12837 409 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 KLHL12Q53G59 568 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 PLBD1Q6P4A8 553 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 WDR82Q6UXN9 313 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 C17orf107Q6ZR85 190 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 KCTD8Q6ZWB6 473 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 PRSS45Q7RTY3 260 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 WDR86Q86TI4 376 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 TIGD4Q8IY51 512 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 TMEM86BQ8N661 226 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 ZNF454Q8N9F8 522 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 OTOSQ8NHW6 89 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 TBC1D15Q8TC07 691 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 THEM6Q8WUY1 208 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 SSMEM1Q8WWF3 244 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 C12orf43Q96C57 262 aaKnown RBP8.11□□□□□ -1.11
VRK3-216ENST00000599342 RTL8AQ9BWD3 113 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 SIRPDQ9H106 197 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 PDP1Q9P0J1 537 aaPredicted RBP8.11□□□□□ -1.11
VRK3-216ENST00000599342 ONECUT1Q9UBC0 465 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 DNAJB11Q9UBS4 358 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 RPUSD1Q9UJJ7 312 aaKnown RBP8.11□□□□□ -1.11
VRK3-216ENST00000599342 MPC1Q9Y5U8 109 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 POMT1Q9Y6A1 747 aa8.11□□□□□ -1.11
VRK3-216ENST00000599342 NKX6-3A6NJ46 265 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 TMEM210A6NLX4 147 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 CDIPTO14735 213 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 GPR37O15354 613 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 PRODHO43272 600 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 WIPF1O43516 503 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 NDUFB3O43676 98 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 SELENOFO60613 162 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 FAM107AO95990 144 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 HMGN1P05114 100 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 MELTFP08582 738 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 GMFBP60983 142 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 RPL15P61313 204 aaKnown RBP8.1□□□□□ -1.11
VRK3-216ENST00000599342 PRDX4Q13162 271 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 GINS1Q14691 196 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 CDONQ4KMG0 1287 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 LRRC10Q5BKY1 277 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 WDR38Q5JTN6 314 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 TREML4Q6UXN2 200 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 VMO1Q7Z5L0 202 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 ADGRG5Q8IZF4 528 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 CMTM4Q8IZR5 234 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 GALNT4Q8N4A0 578 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 ITPKCQ96DU7 683 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 CLPTM1LQ96KA5 538 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 AMELYQ99218 206 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 CCL13Q99616 98 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 THTPAQ9BU02 230 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 CHIAQ9BZP6 476 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 C1orf21Q9H246 121 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 NIPAL2Q9H841 368 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 YY1AP1Q9H869 796 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 CNTD2Q9H8S5 307 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 BEX1Q9HBH7 125 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 ZNF391Q9UJN7 358 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 LAMP5Q9UJQ1 280 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 CAB39Q9Y376 341 aaPredicted RBP8.1□□□□□ -1.11
VRK3-216ENST00000599342 RHBDD3Q9Y3P4 386 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 MMP24Q9Y5R2 645 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 KPTNQ9Y664 436 aa8.1□□□□□ -1.11
VRK3-216ENST00000599342 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
VRK3-216ENST00000599342 A0A1B0GW55 424 aa8.09□□□□□ -1.11
VRK3-216ENST00000599342 AQP12BA6NM10 295 aa8.09□□□□□ -1.11
VRK3-216ENST00000599342 ZNF850A8MQ14 1090 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms