RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 TP63Q9H3D4 680 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 BEX1Q9HBH7 125 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 KCNMB2Q9Y691 235 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 PTPRQQ9UMZ3 2332 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 A0A0A6YYH2 397 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 A6NJ64 397 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 FARS2O95363 451 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 LCATP04180 440 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 S100A1P23297 94 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 GSG1Q2KHT4 349 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 LINC00303Q3SY05 128 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 NRN1LQ496H8 165 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 PABPC1L2AQ5JQF8 200 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 RTN4RL2Q86UN3 420 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 TMEM104Q8NE00 496 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 CPEB3Q8NE35 698 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 OR4C16Q8NGL9 310 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 AKAP1Q92667 903 aaKnown RBP eCLIP14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 APH1AQ96BI3 265 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 REEP6Q96HR9 211 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 CHST5Q9GZS9 411 aa14.85□□□□□ -0.03
SHKBP1-216ENST00000598201 TMEM235A6NFC5 223 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 ZNF587BE7ETH6 402 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 PRF1P14222 555 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 TNK1Q13470 666 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 MCEMP1Q8IX19 187 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 CDH26Q8IXH8 852 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 ZNF101Q8IZC7 436 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 BEST4Q8NFU0 473 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 OR56B4Q8NH76 319 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 OR10A4Q9H209 315 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 FBLN5Q9UBX5 448 aa14.84□□□□□ -0.03
SHKBP1-216ENST00000598201 A0A1W2PP11 408 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 METTL21EPA6NDL7 271 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 ZNF503-AS2A6NEH8 195 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 ZNHIT1O43257 154 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 KISS1Q15726 138 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 ZFP69Q49AA0 526 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 GIMAP1Q8WWP7 306 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 DVL3Q92997 716 aaPredicted RBP14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 GPER1Q99527 375 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 NICN1Q9BSH3 213 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 B3GNT2Q9NY97 397 aa14.83□□□□□ -0.03
SHKBP1-216ENST00000598201 MGAQ8IWI9 3026 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 A0A0A6YYD4 124 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 MTRF1O75570 445 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 HLA-HP01893 362 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 CD3DP04234 171 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 LPLP06858 475 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 CSF1P09603 554 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 GTF2F2P13984 249 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 VEGFCP49767 419 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 RAG2P55895 527 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 FAPQ12884 760 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 FCN2Q15485 313 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 ST3GAL2Q16842 350 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 ZNF260Q3ZCT1 412 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 C1QL2Q7Z5L3 287 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 IQCF2Q8IXL9 164 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 OR5D18Q8NGL1 313 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 PP6455Q8WZ26 134 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 AQP3Q92482 292 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 MS4A3Q96HJ5 214 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 TAS2R8Q9NYW2 309 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 UPB1Q9UBR1 384 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 PRSS50Q9UI38 385 aa14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 MAP1BP46821 2468 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-216ENST00000598201 OR6C65A6NJZ3 312 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 SLC22A20A6NK97 555 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 SULT1C2O00338 296 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 RAB12Q6IQ22 244 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 ZNF100Q8IYN0 542 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 SEMA6DQ8NFY4 1073 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 OR8S1Q8NH09 359 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 PIGTQ969N2 578 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 ACTR6Q9GZN1 396 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 LPAR5Q9H1C0 372 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 OR51J1Q9H342 316 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 BANF2Q9H503 90 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 C12orf49Q9H741 205 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 NOX3Q9HBY0 568 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 MYO7BQ6PIF6 2116 aa14.82□□□□□ -0.04
SHKBP1-216ENST00000598201 ARPC1BO15143 372 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 PEX14O75381 377 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 MPIG6BO95866 241 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 STK11Q15831 433 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 Q6ZTK2 550 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 CHST4Q8NCG5 386 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 C10orf35Q96D05 121 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 CYYR1Q96J86 154 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 SCPEP1Q9HB40 452 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 GPR173Q9NS66 373 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 LOC100509620A0A075B734 347 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 CDC14BO60729 498 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 CEACAM4O75871 244 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 ALX3O95076 343 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 IGHG3P01860 377 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 HPXP02790 462 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 EDN3P14138 238 aa14.81□□□□□ -0.04
SHKBP1-216ENST00000598201 AGTR1P30556 359 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms