RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RRM2P31350 389 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 GNALP38405 381 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 ENTPD1P49961 510 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 PCK2Q16822 640 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 TIGD6Q17RP2 521 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 TEX30Q5JUR7 227 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 DTX3Q8N9I9 347 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 CYB561A3Q8NBI2 242 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 LY6G5BQ8NDX9 201 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 OR52H1Q8NGJ2 320 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 LRRC29Q8WV35 223 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 SLAMF6Q96DU3 332 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 DNTTIP1Q9H147 329 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 ABCB9Q9NP78 766 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 IL1RAPQ9NPH3 570 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 CENPMQ9NSP4 180 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 ZNRD1Q9P1U0 126 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 CDH10Q9Y6N8 788 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 COMMD3-BMI1R4GMX3 469 aa14.01□□□□□ -0.17
PNKP-210ENST00000597965 SEMG1P04279 462 aa14□□□□□ -0.17
PNKP-210ENST00000597965 HSD11B1P28845 292 aa14□□□□□ -0.17
PNKP-210ENST00000597965 PYCR1P32322 319 aa14□□□□□ -0.17
PNKP-210ENST00000597965 PRKXP51817 358 aa14□□□□□ -0.17
PNKP-210ENST00000597965 KRTAP10-3P60369 221 aa14□□□□□ -0.17
PNKP-210ENST00000597965 ACTR3P61158 418 aa14□□□□□ -0.17
PNKP-210ENST00000597965 HOXA4Q00056 320 aaPredicted RBP14□□□□□ -0.17
PNKP-210ENST00000597965 IL5RAQ01344 420 aa14□□□□□ -0.17
PNKP-210ENST00000597965 NCR3LG1Q68D85 454 aa14□□□□□ -0.17
PNKP-210ENST00000597965 C11orf88Q6PI97 169 aa14□□□□□ -0.17
PNKP-210ENST00000597965 C1orf122Q6ZSJ8 110 aa14□□□□□ -0.17
PNKP-210ENST00000597965 Q6ZSV7 163 aa14□□□□□ -0.17
PNKP-210ENST00000597965 PDZD9Q8IXQ8 264 aa14□□□□□ -0.17
PNKP-210ENST00000597965 CSNK2A3Q8NEV1 391 aa14□□□□□ -0.17
PNKP-210ENST00000597965 OR1M1Q8NGA1 313 aa14□□□□□ -0.17
PNKP-210ENST00000597965 RGCCQ9H4X1 137 aa14□□□□□ -0.17
PNKP-210ENST00000597965 IL20Q9NYY1 176 aa14□□□□□ -0.17
PNKP-210ENST00000597965 BAIAP2Q9UQB8 552 aa14□□□□□ -0.17
PNKP-210ENST00000597965 N6AMT1Q9Y5N5 214 aa14□□□□□ -0.17
PNKP-210ENST00000597965 IGHV3OR15-7A0A075B7D8 119 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 ANKRD61A6NGH8 418 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 TVP23AA6NH52 213 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 ANXA2P2A6NMY6 339 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 ZNF593O00488 134 aaPredicted RBP13.99□□□□□ -0.17
PNKP-210ENST00000597965 TBX1O43435 398 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 ANXA2P07355 339 aaKnown RBP13.99□□□□□ -0.17
PNKP-210ENST00000597965 CSF1P09603 554 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 RPS27P42677 84 aaKnown RBP13.99□□□□□ -0.17
PNKP-210ENST00000597965 BLMHQ13867 455 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 WDR38Q5JTN6 314 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 C1orf146Q5VVC0 180 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 WDR82Q6UXN9 313 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 SLC16A9Q7RTY1 509 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 MED30Q96HR3 178 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 NSMCE2Q96MF7 247 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 CCL13Q99616 98 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 MICU1Q9BPX6 476 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 FAM234AQ9H0X4 552 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 POMPQ9Y244 141 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 V9GYQ6 96 aa13.99□□□□□ -0.17
PNKP-210ENST00000597965 ZNF816-ZNF321PA0A0X1KG74 233 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 NKX6-3A6NJ46 265 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 NPFFO15130 113 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 IFNGP01579 166 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 SLC2A1P11166 492 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 HSD17B1P14061 328 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 CX3CR1P49238 355 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 FAM3AP98173 230 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 ACSM1Q08AH1 577 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 SAMD4BQ5PRF9 694 aaKnown RBP13.98□□□□□ -0.17
PNKP-210ENST00000597965 ATPAF1Q5TC12 328 aaPredicted RBP13.98□□□□□ -0.17
PNKP-210ENST00000597965 PGBD2Q6P3X8 592 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 Q6ZTK2 550 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 C8orf46Q8TAG6 207 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 REEP6Q96HR9 211 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 DDOQ99489 341 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 DCTN5Q9BTE1 182 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 EGLN3Q9H6Z9 239 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 METTL8Q9H825 291 aaKnown RBP13.98□□□□□ -0.17
PNKP-210ENST00000597965 TBC1D23Q9NUY8 699 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 DNAJB11Q9UBS4 358 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 FBLN5Q9UBX5 448 aa13.98□□□□□ -0.17
PNKP-210ENST00000597965 NKX1-2Q9UD57 310 aaPredicted RBP13.98□□□□□ -0.17
PNKP-210ENST00000597965 TMEM210A6NLX4 147 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 RNASEK-C17orf49H0YIS7 233 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 UBE2E1P51965 193 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 HMGA2P52926 109 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 SLC25A1P53007 311 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 DBPQ10586 325 aaPredicted RBP13.97□□□□□ -0.17
PNKP-210ENST00000597965 POU4F2Q12837 409 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 RASSF6Q6ZTQ3 369 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 C11orf53Q8IXP5 236 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 RNF148Q8N7C7 305 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 SLC37A3Q8NCC5 494 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 PAPD5Q8NDF8 572 aaKnown RBP13.97□□□□□ -0.17
PNKP-210ENST00000597965 OR51L1Q8NGJ5 315 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 OR9Q1Q8NGQ5 310 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 OR6K6Q8NGW6 343 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 OR10Z1Q8NGY1 313 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 FAM110DQ8TAY7 271 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms