RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PTTG3PQ9NZH4 202 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 ERVK-18Q9QC07 812 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 BAIAP2Q9UQB8 552 aa11.27□□□□□ -0.61
SHKBP1-208ENST00000595726 RNASEK-C17orf49H0YIS7 233 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 J3QW42 95 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 GNGT2O14610 69 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 FKBP6O75344 327 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 HLA-DQA2P01906 255 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 FBP1P09467 338 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 RAC2P15153 192 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 TUBG1P23258 451 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 PYCR1P32322 319 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 GGT2P36268 569 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 NPY4RP50391 375 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 PRSS12P56730 875 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 CBX1P83916 185 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 CD69Q07108 199 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 CRMP1Q14194 572 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 SLC36A3Q495N2 470 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 LYPD4Q6UWN0 246 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 BTN2A1Q7KYR7 527 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 FGFRL1Q8N441 504 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 PNKDQ8N490 385 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 PAPD5Q8NDF8 572 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 PROKR2Q8NFJ6 384 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 OR9Q1Q8NGQ5 310 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 OR2T4Q8NH00 348 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 SLCO4A1Q96BD0 722 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 TUBG2Q9NRH3 451 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 UFSP2Q9NUQ7 469 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 CYB5R1Q9UHQ9 305 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 DNAH1Q9P2D7 4330 aa11.26□□□□□ -0.61
SHKBP1-208ENST00000595726 ADAM20O43506 726 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 FAM20BO75063 409 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 CD28P10747 220 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 PSKH1P11801 424 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 IRF2P14316 349 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 RPS27P42677 84 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 KIR2DS4P43632 304 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 RGS6P49758 472 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 KRTAP10-11P60412 298 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 COL10A1Q03692 680 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 POU4F2Q12837 409 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 MAB21L1Q13394 359 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 MPPED2Q15777 294 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 KRTAP27-1Q3LI81 207 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 PRAMEF6Q5VXH4 476 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 HS3ST5Q8IZT8 346 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 IQCF1Q8N6M8 205 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 OR51L1Q8NGJ5 315 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 TEX47Q8TBZ9 253 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 COG8Q96MW5 612 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 ZNF582Q96NG8 517 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 NMNAT2Q9BZQ4 307 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 YY1AP1Q9H869 796 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 WDR76Q9H967 626 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 PNRC2Q9NPJ4 139 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 CMC2Q9NRP2 79 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 GAR1Q9NY12 217 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 KCNG2Q9UJ96 466 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 COMMD3-BMI1R4GMX3 469 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 STAB2Q8WWQ8 2551 aa11.25□□□□□ -0.61
SHKBP1-208ENST00000595726 TVP23AA6NH52 213 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 H3BN98 237 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 E2F6O75461 281 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 GYPBP06028 91 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 CLUP10909 449 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 SPI1P17947 270 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 RASSF2P50749 326 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 SLC25A1P53007 311 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 EMX1Q04741 257 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 LY6EQ16553 131 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 RSPO1Q2MKA7 263 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 OR2AJ1Q8NGZ0 328 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 APOBEC3DQ96AK3 386 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 MAP6Q96JE9 813 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 PITX2Q99697 317 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 ATF6BQ99941 703 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 SIRT7Q9NRC8 400 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 DNAJB9Q9UBS3 223 aa11.24□□□□□ -0.61
SHKBP1-208ENST00000595726 RIIAD1A6NNX1 92 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 H3BUX3 64 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 DVL1O14640 695 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 ATP5HO75947 161 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 IFNGP01579 166 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 GYPAP02724 150 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 ACSM4P0C7M7 580 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 ZNF823P16415 610 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 ZNF3P17036 446 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 GRK5P34947 590 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 KLRD1Q13241 179 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 CDONQ4KMG0 1287 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 FBXW12Q6X9E4 464 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 COLCA1Q6ZS62 124 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 OR2T6Q8NHC8 308 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 CITED2Q99967 270 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 HCAR1Q9BXC0 346 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 CNTD2Q9H8S5 307 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 TMEM100Q9NV29 134 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms