RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 APOC1P02654 83 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 CFL1P23528 166 aaKnown RBP19.7■□□□□ 0.74
LSM4-202ENST00000593564 HSD11B1P28845 292 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 CSNK2BP67870 215 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 EIF2B1Q14232 305 aaKnown RBP19.7■□□□□ 0.74
LSM4-202ENST00000593564 WDR38Q5JTN6 314 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 LINC01590Q5TEZ4 76 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 C16orf89Q6UX73 402 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 SLC36A1Q7Z2H8 476 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 PDZD9Q8IXQ8 264 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 DEFB107AQ8IZN7 70 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 FGFRL1Q8N441 504 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 RNF133Q8WVZ7 376 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 C12orf43Q96C57 262 aaKnown RBP19.7■□□□□ 0.74
LSM4-202ENST00000593564 TLNRD1Q9H1K6 362 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 DPAGT1Q9H3H5 408 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 ARL8BQ9NVJ2 186 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 ARMC1Q9NVT9 282 aa19.7■□□□□ 0.74
LSM4-202ENST00000593564 GPR37O15354 613 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 ATP6V1B2P21281 511 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 NAA10P41227 235 aaPredicted RBP19.69■□□□□ 0.74
LSM4-202ENST00000593564 PROK1P58294 105 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 ELF3P78545 371 aaPredicted RBP19.69■□□□□ 0.74
LSM4-202ENST00000593564 METAP1DQ6UB28 335 aaPredicted RBP19.69■□□□□ 0.74
LSM4-202ENST00000593564 CYP2R1Q6VVX0 501 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 GDPGP1Q6ZNW5 385 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 FAM216BQ8N7L0 139 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 OR52H1Q8NGJ2 320 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 DGCR6LQ9BY27 220 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 ACTR3BQ9P1U1 418 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 ONECUT1Q9UBC0 465 aa19.69■□□□□ 0.74
LSM4-202ENST00000593564 RIIAD1A6NNX1 92 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 SOX14O95416 240 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 GSK3AP49840 483 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 PPP1R8Q12972 351 aaKnown RBP19.68■□□□□ 0.74
LSM4-202ENST00000593564 KLHL12Q53G59 568 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 ASPHD2Q6ICH7 369 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 FAM57BQ71RH2 274 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 CPLX4Q7Z7G2 160 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 CMTM4Q8IZR5 234 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 CSNK2A3Q8NEV1 391 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 NPRL2Q8WTW4 380 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 LRTOMTQ8WZ04 291 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 ABHD6Q9BV23 337 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 OR10A2Q9H208 303 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 CMC2Q9NRP2 79 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 CAB39Q9Y376 341 aaPredicted RBP19.68■□□□□ 0.74
LSM4-202ENST00000593564 FAM96BQ9Y3D0 163 aa19.68■□□□□ 0.74
LSM4-202ENST00000593564 ACOT8O14734 319 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 ZNF3P17036 446 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 GNALP38405 381 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 ZNF121P58317 390 aaPredicted RBP19.67■□□□□ 0.74
LSM4-202ENST00000593564 SNCBQ16143 134 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 MICAQ29983 383 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 GALNT4Q8N4A0 578 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 ZSCAN4Q8NAM6 433 aaPredicted RBP19.67■□□□□ 0.74
LSM4-202ENST00000593564 OR6N2Q8NGY6 317 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 ITPKCQ96DU7 683 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 SEH1LQ96EE3 360 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 INTS14Q96SY0 518 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 RBM4BQ9BQ04 359 aaKnown RBP19.67■□□□□ 0.74
LSM4-202ENST00000593564 PAPOLGQ9BWT3 736 aaKnown RBP19.67■□□□□ 0.74
LSM4-202ENST00000593564 RGCCQ9H4X1 137 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 MAGIXQ9H6Y5 334 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 PPP1R3EQ9H7J1 279 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 PRPF19Q9UMS4 504 aaKnown RBP19.67■□□□□ 0.74
LSM4-202ENST00000593564 RHBDD3Q9Y3P4 386 aa19.67■□□□□ 0.74
LSM4-202ENST00000593564 CDIPTO14735 213 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 NDUFB3O43676 98 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 OPRL1P41146 370 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 TGM4P49221 684 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 IL5RAQ01344 420 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 GUCA2AQ02747 115 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 ATPAF1Q5TC12 328 aaPredicted RBP19.66■□□□□ 0.74
LSM4-202ENST00000593564 STUMQ69YW2 141 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 ERI1Q8IV48 349 aaKnown RBP19.66■□□□□ 0.74
LSM4-202ENST00000593564 FTMTQ8N4E7 242 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 MICU1Q9BPX6 476 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 DCTN5Q9BTE1 182 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 VNN3Q9NY84 501 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 DNAJC27Q9NZQ0 273 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 ZNRD1Q9P1U0 126 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 ZNF319Q9P2F9 582 aa19.66■□□□□ 0.74
LSM4-202ENST00000593564 SAMHD1Q9Y3Z3 626 aaKnown RBP19.66■□□□□ 0.74
LSM4-202ENST00000593564 TCRBV5S2A0A599 114 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 ANXA2P2A6NMY6 339 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 FBP1P09467 338 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 AMY2BP19961 511 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 GSTT1P30711 240 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 MXRA7P84157 204 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 IKZF1Q13422 519 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 TAF9Q16594 264 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 GFOD2Q3B7J2 385 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 LRRC10Q5BKY1 277 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 OR2T5Q6IEZ7 315 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 Q6ZSV7 163 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 SHFQ7M4L6 423 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 OR10Z1Q8NGY1 313 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 OR2T29Q8NH02 315 aa19.65■□□□□ 0.74
LSM4-202ENST00000593564 C8orf46Q8TAG6 207 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms