RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ZNF806P0C7X5 589 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 UBBP0CG47 229 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 B4GALT1P15291 398 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 RFC3P40938 356 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 PTGFRP43088 359 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 TMEM50BP56557 158 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 RNASE10Q5GAN6 216 aaKnown RBP17.25■□□□□ 0.35
MBD3-209ENST00000592012 RIPPLY2Q5TAB7 128 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 ZNF774Q6NX45 483 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 C1QL2Q7Z5L3 287 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 FAM109AQ8N4B1 249 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 CCDC107Q8WV48 283 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 TNFAIP8L1Q8WVP5 186 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 HES7Q9BYE0 225 aa17.25■□□□□ 0.35
MBD3-209ENST00000592012 ZNF703Q9H7S9 590 aaPredicted RBP17.25■□□□□ 0.35
MBD3-209ENST00000592012 MYOZ1Q9NP98 299 aaPredicted RBP17.25■□□□□ 0.35
MBD3-209ENST00000592012 PLSCR5A0PG75 271 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 ANKRD34BA5PLL1 514 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 LINC01387J3KSC0 135 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 MTRF1O75570 445 aaKnown RBP17.24■□□□□ 0.35
MBD3-209ENST00000592012 SIX6O95475 246 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 MPZP25189 248 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 ALDH3B1P43353 468 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 CXADRP78310 365 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 DHODHQ02127 395 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 DRAM2Q6UX65 266 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 ZNF680Q8NEM1 530 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 C10orf35Q96D05 121 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 RAB3CQ96E17 227 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 PRRT1Q99946 306 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 OR10A2Q9H208 303 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 IL17BQ9UHF5 180 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 OPN4Q9UHM6 478 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 CRTAPO75718 401 aaPredicted RBP17.24■□□□□ 0.35
MBD3-209ENST00000592012 NAT2P11245 290 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 ITGA3P26006 1051 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 HES3Q5TGS1 186 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 TMED4Q7Z7H5 227 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 SULF2Q8IWU5 870 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 PNLDC1Q8NA58 520 aaKnown RBP17.24■□□□□ 0.35
MBD3-209ENST00000592012 CCDC54Q8NEL0 328 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 OR5D18Q8NGL1 313 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 OR1F12Q8NHA8 337 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 NPRL2Q8WTW4 380 aa17.24■□□□□ 0.35
MBD3-209ENST00000592012 DNAJC13O75165 2243 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 TNFSF15O95150 251 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 HPNP05981 417 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 CELA3AP09093 270 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 GSTP1P09211 210 aaKnown RBP17.23■□□□□ 0.35
MBD3-209ENST00000592012 PATE4P0C8F1 98 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 ZNF32P17041 273 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 SCRN3Q0VDG4 424 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 OR1C1Q15619 314 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 CEACAM16Q2WEN9 425 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 SFRP5Q5T4F7 317 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 MRGPRFQ96AM1 343 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 FOXB1Q99853 325 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 TMEM9BQ9NQ34 198 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 IFT46Q9NQC8 304 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 GHRLQ9UBU3 117 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 STMND1H3BQB6 276 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 H3BUI4 141 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 MPC2O95563 127 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 HIST1H1DP16402 221 aaKnown RBP17.23■□□□□ 0.35
MBD3-209ENST00000592012 HRH1P35367 487 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 HGFACQ04756 655 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.23■□□□□ 0.35
MBD3-209ENST00000592012 TMPRSS13Q9BYE2 586 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 GPR35Q9HC97 309 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 PLA2G3Q9NZ20 509 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 ZNF407Q9C0G0 2248 aa17.23■□□□□ 0.35
MBD3-209ENST00000592012 FREM1Q5H8C1 2179 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 OR6C6A6NF89 314 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 GOSR2O14653 212 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 LHX2P50458 406 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 FAM189A2Q15884 450 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 KRTAP27-1Q3LI81 207 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 PDSS1Q5T2R2 415 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 DCAF12L2Q5VW00 463 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 FAM89BQ8N5H3 189 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 OR56B1Q8NGI3 324 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 ABI3Q9P2A4 366 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 VSIG4Q9Y279 399 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 PLEKHA6Q9Y2H5 1048 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 GNG2P59768 71 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 PSG4Q00888 419 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 MPPED2Q15777 294 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 LINC00696Q6ZRV3 163 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 OR2AE1Q8NHA4 323 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 AKR7LQ8NHP1 331 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 HAS2Q92819 552 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 URM1Q9BTM9 101 aaKnown RBP17.22■□□□□ 0.35
MBD3-209ENST00000592012 DPCDQ9BVM2 203 aaPredicted RBP17.22■□□□□ 0.35
MBD3-209ENST00000592012 FAM117AQ9C073 453 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 CST11Q9H112 138 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 B4GALT7Q9UBV7 327 aa17.22■□□□□ 0.35
MBD3-209ENST00000592012 FCGR2AP12318 317 aa17.21■□□□□ 0.35
MBD3-209ENST00000592012 ACKR3P25106 362 aa17.21■□□□□ 0.35
MBD3-209ENST00000592012 RPS27AP62979 156 aaKnown RBP17.21■□□□□ 0.35
MBD3-209ENST00000592012 AIMP2Q13155 320 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms