RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 GABPB1Q06547 395 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-227ENST00000591849 RIPPLY1Q0D2K3 151 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 HNRNPA0Q13151 305 aaKnown RBP8.48□□□□□ -1.05
BRCA1-227ENST00000591849 ZMYND11Q15326 602 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 OR8B8Q15620 311 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 MPPED2Q15777 294 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 KCNJ8Q15842 424 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF181Q2M3W8 571 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 ESCO2Q56NI9 601 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 IL17RELQ6ZVW7 336 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 PRSS45Q7RTY3 260 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 PLPP7Q8NBV4 271 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 DEFB108BQ8NET1 73 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 OR51E1Q8TCB6 317 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 MRPL48Q96GC5 212 aaKnown RBP8.48□□□□□ -1.05
BRCA1-227ENST00000591849 C1orf159Q96HA4 380 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 RNF170Q96K19 258 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 SIGLEC11Q96RL6 698 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 MBOAT4Q96T53 435 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 RTL8AQ9BWD3 113 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 PATZ1Q9HBE1 687 aaKnown RBP8.48□□□□□ -1.05
BRCA1-227ENST00000591849 FAM118AQ9NWS6 357 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 FAM206AQ9NX38 181 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 MIOXQ9UGB7 285 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 GNG8Q9UK08 70 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 OR52A1Q9UKL2 312 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 MPC1Q9Y5U8 109 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 SNX5Q9Y5X3 404 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 R4GMQ9 66 aa8.48□□□□□ -1.05
BRCA1-227ENST00000591849 A0A0G2JMP0 313 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 A0A0U1RQV5 110 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 A0A0X1KG70 313 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF816-ZNF321PA0A0X1KG74 233 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 A0A1B0GWJ7 208 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 FAM157CP0CG43 387 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 RPS2P15880 293 aaKnown RBP8.47□□□□□ -1.05
BRCA1-227ENST00000591849 RBMXP38159 391 aaKnown RBP8.47□□□□□ -1.05
BRCA1-227ENST00000591849 PMELP40967 661 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 PRDX4Q13162 271 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 OCLNQ16625 522 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 FAM201AQ5SY85 155 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 DCAF12L2Q5VW00 463 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 MOB3CQ70IA8 216 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 NLRC3Q7RTR2 1065 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 TEX29Q8N6K0 151 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 SEMA6DQ8NFY4 1073 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 OR4M2Q8NGB6 313 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 OR8B3Q8NGG8 313 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 Q8TCH9 128 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 CYGBQ8WWM9 190 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 ITFG2Q969R8 447 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 LYZL4Q96KX0 146 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 OR8B2Q96RD0 313 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 MOB1AQ9H8S9 216 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 TMEM165Q9HC07 324 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 TRIM36Q9NQ86 728 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 GPR84Q9NQS5 396 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 C8orf4Q9NR00 106 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 SMPD3Q9NY59 655 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-227ENST00000591849 NUFIP1Q9UHK0 495 aaKnown RBP8.47□□□□□ -1.05
BRCA1-227ENST00000591849 MRM2Q9UI43 246 aaKnown RBP8.47□□□□□ -1.05
BRCA1-227ENST00000591849 ENPP5Q9UJA9 477 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 MXRA5Q9NR99 2828 aa8.47□□□□□ -1.05
BRCA1-227ENST00000591849 TRAV38-1A0A0B4J264 116 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 A0A1B0GVI7 797 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 ERICH4A6NGS2 130 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 CEACAM18A8MTB9 384 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 PRR32B1ATL7 298 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 C3orf80F5H4A9 247 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 LGALS8O00214 317 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 P2RY10O00398 339 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 SULT1C4O75897 302 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 PNPP00491 289 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 CST4P01036 141 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 CPT2P23786 658 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 CD80P33681 288 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 GNB2P62879 340 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 ACTC1P68032 377 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 ACTA1P68133 377 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 MFGE8Q08431 387 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-227ENST00000591849 SCGB2A2Q13296 93 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 ODF4Q2M2E3 257 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 TP53I3Q53FA7 332 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 SLC25A30Q5SVS4 291 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 LIPNQ5VXI9 398 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 TTC23Q5W5X9 447 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 PLCXD3Q63HM9 321 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 LPCAT4Q643R3 524 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 SFRP4Q6FHJ7 346 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF826PQ6ZT77 177 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 KCTD20Q7Z5Y7 419 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 ZDHHC23Q8IYP9 409 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 RFLNBQ8N5W9 214 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 C19orf18Q8NEA5 215 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 RHOXF1Q8NHV9 184 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 SPATA3Q8NHX4 192 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 LRRC29Q8WV35 223 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 PPP1R14AQ96A00 147 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 NEIL1Q96FI4 390 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-227ENST00000591849 RDH12Q96NR8 316 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms