RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 C1orf123Q9NWV4 160 aa15.23■□□□□ 0.03
DDX39A-212ENST00000590260 RNF7Q9UBF6 113 aa15.23■□□□□ 0.03
DDX39A-212ENST00000590260 CTSZQ9UBR2 303 aa15.23■□□□□ 0.03
DDX39A-212ENST00000590260 NUFIP1Q9UHK0 495 aaKnown RBP15.23■□□□□ 0.03
DDX39A-212ENST00000590260 IKZF2Q9UKS7 526 aa15.23■□□□□ 0.03
DDX39A-212ENST00000590260 LOC105371242A0A075B767 164 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 A0A1B0GTI1 187 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 ACOD1A6NK06 481 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 ZNF850A8MQ14 1090 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 ZNF670-ZNF695F2Z2N8 137 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-212ENST00000590260 CST4P01036 141 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 RIDAP52758 137 aaKnown RBP15.22■□□□□ 0.03
DDX39A-212ENST00000590260 CDC42P60953 191 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 SNRPGP62308 76 aaKnown RBP15.22■□□□□ 0.03
DDX39A-212ENST00000590260 ELF3P78545 371 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-212ENST00000590260 EGR3Q06889 387 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 ZNF154Q13106 437 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 PRDX4Q13162 271 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 DMRTC1Q5HYR2 192 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 SLC25A30Q5SVS4 291 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 FAHD2BQ6P2I3 314 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-212ENST00000590260 MUC20Q8N307 709 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-212ENST00000590260 DEFB108BQ8NET1 73 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 CSNK2A3Q8NEV1 391 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 OR1M1Q8NGA1 313 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 OR51E1Q8TCB6 317 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 FAHD2AQ96GK7 314 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 C9orf16Q9BUW7 83 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 PAPOLGQ9BWT3 736 aaKnown RBP15.22■□□□□ 0.03
DDX39A-212ENST00000590260 TLNRD1Q9H1K6 362 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 FN3KRPQ9HA64 309 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 GPR84Q9NQS5 396 aa15.22■□□□□ 0.03
DDX39A-212ENST00000590260 NOP16Q9Y3C1 178 aaKnown RBP15.22■□□□□ 0.03
DDX39A-212ENST00000590260 LRRC30A6NM36 301 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 ANKRD65E5RJM6 399 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 FSHBP01225 129 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 HNF1AP20823 631 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 ISL1P61371 349 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 SFRP4Q6FHJ7 346 aaPredicted RBP15.21■□□□□ 0.03
DDX39A-212ENST00000590260 WDR82Q6UXN9 313 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 ENTHD1Q8IYW4 607 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 OR11L1Q8NGX0 322 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 TRUB1Q8WWH5 349 aaKnown RBP15.21■□□□□ 0.03
DDX39A-212ENST00000590260 OR5P3Q8WZ94 311 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 SEH1LQ96EE3 360 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 PCDHB10Q9UN67 800 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 SLC22A13Q9Y226 551 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 R4GMQ9 66 aa15.21■□□□□ 0.03
DDX39A-212ENST00000590260 PPIAL4CA0A0B4J2A2 164 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 PHYHO14832 338 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 OR2T7P0C7T2 308 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 ADRA2CP18825 462 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 PSMB10P40306 273 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 TMED1Q13445 227 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 OCLNQ16625 522 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 DCAF12L2Q5VW00 463 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 ZBTB49Q6ZSB9 765 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 Q6ZSR3 168 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 C10orf67Q8IYJ2 551 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 ELMOD2Q8IZ81 293 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 C1orf87Q8N0U7 546 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 GALNT4Q8N4A0 578 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 OR2T27Q8NH04 317 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 OR8S1Q8NH09 359 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 FAM71F1Q96KD3 344 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-212ENST00000590260 C14orf119Q9NWQ9 140 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 ZNF391Q9UJN7 358 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 OR52A1Q9UKL2 312 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 MPC1Q9Y5U8 109 aa15.2■□□□□ 0.02
DDX39A-212ENST00000590260 A0A0G2JMP0 313 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-212ENST00000590260 A0A0X1KG70 313 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 LOC110117498-PIK3R3F6TDL0 507 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 LGALS8O00214 317 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 FOXH1O75593 365 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 RPS2P15880 293 aaKnown RBP15.19■□□□□ 0.02
DDX39A-212ENST00000590260 ZNF12P17014 697 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 PCMT1P22061 227 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 POU4F2Q12837 409 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 ZNF829Q3KNS6 432 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-212ENST00000590260 FAM76BQ5HYJ3 339 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 DCDC5Q6ZRR9 648 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 FAM90A1Q86YD7 464 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 BOLLQ8N9W6 283 aaKnown RBP15.19■□□□□ 0.02
DDX39A-212ENST00000590260 OR10H4Q8NGA5 316 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 OR4M2Q8NGB6 313 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 PIGCQ92535 297 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 RORBQ92753 470 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 NEIL1Q96FI4 390 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-212ENST00000590260 FAM118AQ9NWS6 357 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 IMPAD1Q9NX62 359 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 MIOXQ9UGB7 285 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 LRCH1Q9Y2L9 728 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 ORC6Q9Y5N6 252 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 GMPPBQ9Y5P6 360 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 INSIG2Q9Y5U4 225 aa15.19■□□□□ 0.02
DDX39A-212ENST00000590260 IGHV3OR15-7A0A075B7D8 119 aa15.18■□□□□ 0.02
DDX39A-212ENST00000590260 ZNF816-ZNF321PA0A0X1KG74 233 aa15.18■□□□□ 0.02
DDX39A-212ENST00000590260 A0A1B0GW55 424 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 1006 ms