RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 P2RY10O00398 339 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 DHRS3O75911 302 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 IGLV3-1P01715 115 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 HTR1AP08908 422 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 VHLP40337 213 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 CHN2P52757 468 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 RIPPLY1Q0D2K3 151 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 MAB21L1Q13394 359 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 MED21Q13503 144 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 ODF4Q2M2E3 257 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 EGFL6Q8IUX8 553 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 RAB1CQ92928 201 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 ERGIC1Q969X5 290 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 GCM1Q9NP62 436 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 ABCB9Q9NP78 766 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 TMEM106BQ9NUM4 274 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 C14orf119Q9NWQ9 140 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 MPC1Q9Y5U8 109 aa18.01■□□□□ 0.47
ATG4D-212ENST00000590096 ZNF816-ZNF321PA0A0X1KG74 233 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 A0A1B0GVI7 797 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 EFCAB10A6NFE3 127 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 RRP9O43818 475 aaKnown RBP18■□□□□ 0.47
ATG4D-212ENST00000590096 CST4P01036 141 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 MYL12AP19105 171 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 GATA4P43694 442 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 WDR38Q5JTN6 314 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 DOK3Q7L591 496 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 MOGAT3Q86VF5 341 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 PRSS35Q8N3Z0 413 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 BPIFB6Q8NFQ5 453 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 PIGCQ92535 297 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 GGHQ92820 318 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 TMEM80Q96HE8 168 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 CHCHD3Q9NX63 227 aaKnown RBP18■□□□□ 0.47
ATG4D-212ENST00000590096 DIMT1Q9UNQ2 313 aaKnown RBP18■□□□□ 0.47
ATG4D-212ENST00000590096 PIGLQ9Y2B2 252 aa18■□□□□ 0.47
ATG4D-212ENST00000590096 EXOSC1Q9Y3B2 195 aaKnown RBP18■□□□□ 0.47
ATG4D-212ENST00000590096 LRRC30A6NM36 301 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 ZNF850A8MQ14 1090 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 XPNPEP2O43895 674 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 UBCP0CG48 685 aaKnown RBP17.99■□□□□ 0.47
ATG4D-212ENST00000590096 PIPP12273 146 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-212ENST00000590096 MVKQ03426 396 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 MRPL28Q13084 256 aaKnown RBP17.99■□□□□ 0.47
ATG4D-212ENST00000590096 PRDX4Q13162 271 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 AVPI1Q5T686 147 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 ZBTB37Q5TC79 503 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 PRAMEF6Q5VXH4 476 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 OR2G2Q8NGZ5 317 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 ZNF420Q8TAQ5 688 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-212ENST00000590096 PELI1Q96FA3 418 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 SMR3AQ99954 134 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 MICU1Q9BPX6 476 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 ZNF649Q9BS31 505 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 NARFLQ9H6Q4 476 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 FN3KRPQ9HA64 309 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 PLCXD1Q9NUJ7 323 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 CNOT2Q9NZN8 540 aaKnown RBP17.99■□□□□ 0.47
ATG4D-212ENST00000590096 ENPP5Q9UJA9 477 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 WIPI2Q9Y4P8 454 aa17.99■□□□□ 0.47
ATG4D-212ENST00000590096 SYT7O43581 403 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 LIMS3P0CW19 117 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 LIMS4P0CW20 117 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 IRF2P14316 349 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 MYF6P23409 242 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 ST3GAL4Q11206 333 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 TMEM249Q2WGJ8 235 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 LAIR2Q6ISS4 152 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 FDX2Q6P4F2 183 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 CLEC9AQ6UXN8 241 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 TMPRSS11AQ6ZMR5 421 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 ZDHHC23Q8IYP9 409 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 C1orf87Q8N0U7 546 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 KLHL36Q8N4N3 616 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 PLPP7Q8NBV4 271 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 OR11L1Q8NGX0 322 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 HAVCR2Q8TDQ0 301 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 HPS1Q92902 700 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 HIST1H2AAQ96QV6 131 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 RTL8AQ9BWD3 113 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 ANKRD60Q9BZ19 345 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 ISG20L2Q9H9L3 353 aaKnown RBP17.98■□□□□ 0.47
ATG4D-212ENST00000590096 UFSP2Q9NUQ7 469 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 CAB39Q9Y376 341 aaPredicted RBP17.98■□□□□ 0.47
ATG4D-212ENST00000590096 NPTNQ9Y639 398 aa17.98■□□□□ 0.47
ATG4D-212ENST00000590096 A0A1B0GTI1 187 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 ISPDA4D126 451 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 LRP5LA4QPB2 252 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 DHRS7CA6NNS2 312 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 HEXAP06865 529 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 GRPP07492 148 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 FAHP16930 419 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 CCL1P22362 96 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 KIR3DL2P43630 455 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 ETV1P50549 477 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 CCR9P51686 369 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 GBX2P52951 348 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-212ENST00000590096 CSNK2BP67870 215 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 ALKBH1Q13686 389 aaKnown RBP17.97■□□□□ 0.47
ATG4D-212ENST00000590096 ZNF181Q2M3W8 571 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms