RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ZNF121P58317 390 aaPredicted RBP8.77□□□□□ -1.01
SDF2-208ENST00000589788 CXCR4P61073 352 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 ZNF92Q03936 586 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 EGR3Q06889 387 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 TIGD6Q17RP2 521 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 NXNL2Q5VZ03 156 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 LAIR2Q6ISS4 152 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 KCTD18Q6PI47 426 aaPredicted RBP8.77□□□□□ -1.01
SDF2-208ENST00000589788 FAM57BQ71RH2 274 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 MEPCEQ7L2J0 689 aaKnown RBP8.77□□□□□ -1.01
SDF2-208ENST00000589788 KRT77Q7Z794 578 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 GID4Q8IVV7 300 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 LINC01356Q8N9X3 169 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 CLDND2Q8NHS1 167 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 Q96MT0 163 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 NR1H4Q96RI1 486 aaPredicted RBP8.77□□□□□ -1.01
SDF2-208ENST00000589788 CNN2Q99439 309 aaKnown RBP8.77□□□□□ -1.01
SDF2-208ENST00000589788 SLC30A2Q9BRI3 323 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 OR10A2Q9H208 303 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 CLN6Q9NWW5 311 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 ERVK13-1Q9NX77 482 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 DNAJC27Q9NZQ0 273 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 PPP1R3CQ9UQK1 317 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 WIPI2Q9Y4P8 454 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 PCDHGB5Q9Y5G0 923 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 TMEM14AQ9Y6G1 99 aa8.77□□□□□ -1.01
SDF2-208ENST00000589788 MALRD1Q5VYJ5 2156 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 CCDC182A6NF36 153 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 H0YL77 283 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 WNT9BO14905 357 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 CRLF1O75462 422 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 HLA-DPB1P04440 258 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 ALOX5APP20292 161 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 CFL1P23528 166 aaKnown RBP8.76□□□□□ -1.01
SDF2-208ENST00000589788 HCCSP53701 268 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 CSNK2BP67870 215 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 OR8G1Q15617 311 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 GFOD2Q3B7J2 385 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 SPRNQ5BIV9 151 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 C6orf141Q5SZD1 244 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 AADACL4Q5VUY2 407 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 LRRN1Q6UXK5 716 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 BCDIN3DQ7Z5W3 292 aaKnown RBP8.76□□□□□ -1.01
SDF2-208ENST00000589788 OR52H1Q8NGJ2 320 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 ASB17Q8WXJ9 295 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 RFKQ969G6 155 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 RAB39BQ96DA2 213 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 PGAM5Q96HS1 289 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 GAL3ST1Q99999 423 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 SOX7Q9BT81 388 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 SLC22A4Q9H015 551 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 NIPAL2Q9H841 368 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 PLCXD1Q9NUJ7 323 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 TMEM106BQ9NUM4 274 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 AASSQ9UDR5 926 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 KLHDC2Q9Y2U9 406 aa8.76□□□□□ -1.01
SDF2-208ENST00000589788 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.75□□□□□ -1.01
SDF2-208ENST00000589788 C5orf63A6NC05 138 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 SNTNA6NMZ2 147 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 ANKRD30BLA7E2S9 258 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 B4DSR2 109 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 F5H5P2 479 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 IFNL4K9M1U5 179 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 SLC1A7O00341 560 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 MLNRO43193 412 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 ENTPD6O75354 484 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 SBK2P0C263 348 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 CCDC159P0C7I6 412 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 CA6P23280 308 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 DDOSTP39656 456 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 CDH15P55291 814 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 SMN1Q16637 294 aaKnown RBP8.75□□□□□ -1.01
SDF2-208ENST00000589788 CHRFAM7AQ494W8 412 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 RBM48Q5RL73 367 aaKnown RBP8.75□□□□□ -1.01
SDF2-208ENST00000589788 OR56B2PQ8NGI1 322 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 CHAC2Q8WUX2 184 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 SPSB4Q96A44 273 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 REEP6Q96HR9 211 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 ADAT1Q9BUB4 502 aaKnown RBP8.75□□□□□ -1.01
SDF2-208ENST00000589788 BEX2Q9BXY8 128 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 MROQ9BYG7 248 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 YTHDF1Q9BYJ9 559 aaKnown RBP8.75□□□□□ -1.01
SDF2-208ENST00000589788 SHARPINQ9H0F6 387 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 RGCCQ9H4X1 137 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 ZNF665Q9H7R5 613 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 GCM1Q9NP62 436 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 MRPL15Q9P015 296 aaKnown RBP8.75□□□□□ -1.01
SDF2-208ENST00000589788 CDC42EP3Q9UKI2 254 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 BLOC1S6Q9UL45 172 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.75□□□□□ -1.01
SDF2-208ENST00000589788 LRP12Q9Y561 859 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 NPTNQ9Y639 398 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 NF1P21359 2839 aa8.75□□□□□ -1.01
SDF2-208ENST00000589788 NIPBLQ6KC79 2804 aaeCLIP8.75□□□□□ -1.01
SDF2-208ENST00000589788 ABCA2Q9BZC7 2435 aa8.74□□□□□ -1.01
SDF2-208ENST00000589788 IGHV3-64DA0A0J9YX35 117 aa8.74□□□□□ -1.01
SDF2-208ENST00000589788 LRRC30A6NM36 301 aa8.74□□□□□ -1.01
SDF2-208ENST00000589788 PSMD9O00233 223 aa8.74□□□□□ -1.01
SDF2-208ENST00000589788 PHYHO14832 338 aa8.74□□□□□ -1.01
SDF2-208ENST00000589788 GMDSO60547 372 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms