RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ZBTB37Q5TC79 503 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 C22orf34Q6ZV56 151 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 JAGN1Q8N5M9 183 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 ZNF671Q8TAW3 534 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 FOXRED1Q96CU9 486 aaPredicted RBP19.18■□□□□ 0.66
ATG4D-209ENST00000588857 ZC3HAV1LQ96H79 300 aaKnown RBP19.18■□□□□ 0.66
ATG4D-209ENST00000588857 CEP19Q96LK0 163 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 KCNJ16Q9NPI9 418 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 ABRACLQ9P1F3 81 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 ASH1LQ9NR48 2969 aaKnown RBP19.17■□□□□ 0.66
ATG4D-209ENST00000588857 ZNF816-ZNF321PA0A0X1KG74 233 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 TUBG1P23258 451 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 DYNC1I2Q13409 638 aaKnown RBP19.17■□□□□ 0.66
ATG4D-209ENST00000588857 CLVS2Q5SYC1 327 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 WFDC8Q8IUA0 241 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 C1orf174Q8IYL3 243 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 FTMTQ8N4E7 242 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 CSNK2A3Q8NEV1 391 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 OR56B2PQ8NGI1 322 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 BCL2L14Q9BZR8 327 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 TUBG2Q9NRH3 451 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 COL12A1Q99715 3063 aa19.17■□□□□ 0.66
ATG4D-209ENST00000588857 ALX3O95076 343 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 HCKP08631 526 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 CALCRP30988 508 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 FBXW12Q6X9E4 464 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 OR5AS1Q8N127 324 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 OR52N4Q8NGI2 321 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 S100ZQ8WXG8 99 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 MRI1Q9BV20 369 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 OR2J1Q9GZK6 312 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 NEK6Q9HC98 313 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 ABCB9Q9NP78 766 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 KCNN3Q9UGI6 736 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 STEAP1Q9UHE8 339 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 SPEF1Q9Y4P9 236 aa19.16■□□□□ 0.66
ATG4D-209ENST00000588857 USP9XQ93008 2570 aaPredicted RBP19.16■□□□□ 0.66
ATG4D-209ENST00000588857 SLC17A2O00624 439 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 GMDSO60547 372 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 NRASP01111 189 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 ALDOBP05062 364 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 UBE2V2Q15819 145 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 RAB11BQ15907 218 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 SEZ6L2Q6UXD5 910 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 TMEM108Q6UXF1 575 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 SLC25A40Q8TBP6 338 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 TRMT10AQ8TBZ6 339 aaKnown RBP19.15■□□□□ 0.66
ATG4D-209ENST00000588857 LIN7BQ9HAP6 207 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 GPR173Q9NS66 373 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 CGGBP1Q9UFW8 167 aaPredicted RBP19.15■□□□□ 0.66
ATG4D-209ENST00000588857 CD300LBA8K4G0 201 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 PAHP00439 452 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 SNRPBP14678 240 aaKnown RBP19.15■□□□□ 0.66
ATG4D-209ENST00000588857 CFPP27918 469 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 CLDN12P56749 244 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 CNN3Q15417 329 aaKnown RBP19.15■□□□□ 0.66
ATG4D-209ENST00000588857 TMEM42Q69YG0 159 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 LAX1Q8IWV1 398 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 PIGCQ92535 297 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 CMBLQ96DG6 245 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 WFIKKN1Q96NZ8 548 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 TECTBQ96PL2 329 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 SORCS2Q96PQ0 1159 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 METTL17Q9H7H0 456 aaPredicted RBP19.15■□□□□ 0.66
ATG4D-209ENST00000588857 HMG20AQ9NP66 347 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 NGBQ9NPG2 151 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 ADAM30Q9UKF2 790 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 RHBDD3Q9Y3P4 386 aa19.15■□□□□ 0.66
ATG4D-209ENST00000588857 A0A0B4J203 849 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 IGKV1-9A0A0C4DH69 117 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 HPGDSO60760 199 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 THBDP07204 575 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 CALCBP10092 127 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 CD37P11049 281 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 RAC2P15153 192 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 CD40P25942 277 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 HTR2CP28335 458 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 TNFSF8P32971 234 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 ZNF93P35789 620 aaPredicted RBP19.14■□□□□ 0.65
ATG4D-209ENST00000588857 ERVS71-1P61550 626 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 CDH26Q8IXH8 852 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 SAMD12Q8N8I0 201 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 OR6M1Q8NGM8 313 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 SSC4DQ8WTU2 575 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 NPRL2Q8WTW4 380 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 PIGTQ969N2 578 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 UQCC2Q9BRT2 126 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 PAPOLGQ9BWT3 736 aaKnown RBP19.14■□□□□ 0.65
ATG4D-209ENST00000588857 CXorf56Q9H5V9 222 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 NDRG3Q9UGV2 375 aa19.14■□□□□ 0.65
ATG4D-209ENST00000588857 CADP27708 2225 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 ANKRD30BLA7E2S9 258 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 CLDN25C9JDP6 229 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 PRKACBP22694 351 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 PTAFRP25105 342 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 AZGP1P25311 298 aaKnown RBP19.13■□□□□ 0.65
ATG4D-209ENST00000588857 SPANXN2Q5MJ10 180 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 C1orf100Q5SVJ3 147 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 OR2T2Q6IF00 324 aa19.13■□□□□ 0.65
ATG4D-209ENST00000588857 SPSB1Q96BD6 273 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms