RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CYC1P08574 325 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 PVALBP20472 110 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-206ENST00000587730 ADH6P28332 368 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 THBS4P35443 961 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 HOXA1P49639 335 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-206ENST00000587730 LSM6P62312 80 aaKnown RBP16.42■□□□□ 0.22
DDX39A-206ENST00000587730 ADAMTS17Q8TE56 1095 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 TMEM230Q96A57 120 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 EMC6Q9BV81 110 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 TPSD1Q9BZJ3 242 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 SLC22A11Q9NSA0 550 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 OSGIN2Q9Y236 505 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 HDGFL3Q9Y3E1 203 aa16.42■□□□□ 0.22
DDX39A-206ENST00000587730 ZNF726A6NNF4 738 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 H3BML4 177 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 SOCS1O15524 211 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 TRAF3IP2O43734 574 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-206ENST00000587730 APOC1P02654 83 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 CSTBP04080 98 aaKnown RBP16.41■□□□□ 0.22
DDX39A-206ENST00000587730 GUCA1AP43080 201 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-206ENST00000587730 NPY4RP50391 375 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 TMEM104Q8NE00 496 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 SLC22A8Q8TCC7 542 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 PP6455Q8WZ26 134 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 SMIM8Q96KF7 97 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 SLC26A1Q9H2B4 701 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 METTL8Q9H825 291 aaKnown RBP16.41■□□□□ 0.22
DDX39A-206ENST00000587730 C14orf166Q9Y224 244 aaKnown RBP16.41■□□□□ 0.22
DDX39A-206ENST00000587730 FREM3P0C091 2139 aa16.41■□□□□ 0.22
DDX39A-206ENST00000587730 FAM157CP0CG43 387 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 PRKACAP17612 351 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 BCKDHBP21953 392 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 OR3A4PP47883 348 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 ACY1Q03154 408 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 CFHR1Q03591 330 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 HIST3H3Q16695 136 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 HFEQ30201 348 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 GFOD2Q3B7J2 385 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 H3F3CQ6NXT2 135 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 WDFY1Q8IWB7 410 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 POC1AQ8NBT0 407 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 TMED6Q8WW62 240 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 UBE2ZQ9H832 354 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-206ENST00000587730 CACNA1CQ13936 2221 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 TTC28Q96AY4 2481 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 TDRD6O60522 2096 aaKnown RBP16.4■□□□□ 0.22
DDX39A-206ENST00000587730 TRBV11-1A0A0K0K1C0 115 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 A0A0U1RQV5 110 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 ZNF705EA8MWA4 302 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-206ENST00000587730 GPR31O00270 319 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 RRP8O43159 456 aaKnown RBP16.4■□□□□ 0.22
DDX39A-206ENST00000587730 ZFAND5O76080 213 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 ABOP16442 354 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 ZNF43P17038 809 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 TMEM50BP56557 158 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 PTCRAQ6ISU1 281 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-206ENST00000587730 TMEM71Q6P5X7 295 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 LDLRAD3Q86YD5 345 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 SKA3Q8IX90 412 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 ZNF283Q8N7M2 679 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 RRNAD1Q96FB5 475 aaKnown RBP16.4■□□□□ 0.22
DDX39A-206ENST00000587730 ARHGAP5-AS1Q96IT6 56 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 RTBDNQ9BSG5 229 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-206ENST00000587730 METTL7AQ9H8H3 244 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 TREM1Q9NP99 234 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 UQCC1Q9NVA1 299 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 C1orf123Q9NWV4 160 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 ASH2LQ9UBL3 628 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 B3GALT1Q9Y5Z6 326 aa16.4■□□□□ 0.22
DDX39A-206ENST00000587730 H0YIZ8 118 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 MBTPS2O43462 519 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 ACTL6AO96019 429 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 GAPDHP04406 335 aaKnown RBP16.39■□□□□ 0.21
DDX39A-206ENST00000587730 CPT2P23786 658 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 PTGFRP43088 359 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 P2RY4P51582 365 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 CAV2P51636 162 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 CSNK2A1P68400 391 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-206ENST00000587730 CSNK2A3Q8NEV1 391 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 OR51T1Q8NGJ9 327 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 OR14K1Q8NGZ2 314 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 OR13G1Q8NGZ3 307 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 CPNE2Q96FN4 548 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-206ENST00000587730 FAM71F1Q96KD3 344 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-206ENST00000587730 TM2D1Q9BX74 207 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 SLC5A7Q9GZV3 580 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 PNRC2Q9NPJ4 139 aaKnown RBP16.39■□□□□ 0.21
DDX39A-206ENST00000587730 PRDM6Q9NQX0 595 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 ZFP57Q9NU63 452 aa16.39■□□□□ 0.21
DDX39A-206ENST00000587730 NAT2P11245 290 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 RBMXP38159 391 aaKnown RBP16.38■□□□□ 0.21
DDX39A-206ENST00000587730 ZNF84P51523 738 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 ZNF133P52736 654 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-206ENST00000587730 SNU13P55769 128 aaKnown RBP16.38■□□□□ 0.21
DDX39A-206ENST00000587730 SUPT4H1P63272 117 aaKnown RBP16.38■□□□□ 0.21
DDX39A-206ENST00000587730 SLC35A1P78382 337 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 IL15RAQ13261 267 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 SMCO1Q147U7 214 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 SLC9A3R2Q15599 337 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 CHRFAM7AQ494W8 412 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms