RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 MALLQ13021 153 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 CD276Q5ZPR3 534 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 DNM1P34Q6PK57 102 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 MRPL21Q7Z2W9 205 aaKnown RBP9.58□□□□□ -0.88
LIG3-207ENST00000586119 AMIGO2Q86SJ2 522 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 WDR86Q86TI4 376 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 PNKDQ8N490 385 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 CYB561A3Q8NBI2 242 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 AQP11Q8NBQ7 271 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 OR51L1Q8NGJ5 315 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 TBC1D15Q8TC07 691 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 FANK1Q8TC84 345 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 DYRK2Q92630 601 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 ZNF799Q96GE5 643 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 DDOQ99489 341 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 CCL13Q99616 98 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 ADAT1Q9BUB4 502 aaKnown RBP9.58□□□□□ -0.88
LIG3-207ENST00000586119 IFT27Q9BW83 186 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 MMP27Q9H306 513 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 FN3KRPQ9HA64 309 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 ZNF556Q9HAH1 456 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 A6NLC8 198 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 H0YHG0 523 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 ARPC3O15145 178 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 PTBP3O95758 552 aaKnown RBP9.57□□□□□ -0.88
LIG3-207ENST00000586119 LHBP01229 141 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 GASTP01350 101 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 LIPFP07098 398 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 AMY2BP19961 511 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 SLC6A6P31641 620 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 PRKXP51817 358 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.57□□□□□ -0.88
LIG3-207ENST00000586119 TAF9Q16594 264 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 SLC36A3Q495N2 470 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 METTL11BQ5VVY1 283 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 RASSF6Q6ZTQ3 369 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 VMO1Q7Z5L0 202 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 TMEM179BQ7Z7N9 219 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 ZSCAN4Q8NAM6 433 aaPredicted RBP9.57□□□□□ -0.88
LIG3-207ENST00000586119 SCCPDHQ8NBX0 429 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 OR9Q2Q8NGE9 314 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 SSMEM1Q8WWF3 244 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 ST8SIA4Q92187 359 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 FEVQ99581 238 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 GABARAPL1Q9H0R8 117 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 EGLN3Q9H6Z9 239 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 DCLRE1BQ9H816 532 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 CNTD2Q9H8S5 307 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 POMT1Q9Y6A1 747 aa9.57□□□□□ -0.88
LIG3-207ENST00000586119 TRAV38-1A0A0B4J264 116 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 hCG_1807616A0A1W2PRN6 198 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 TIMM23O14925 209 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 GMDSO60547 372 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 SELLP14151 372 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 PPP1R8Q12972 351 aaKnown RBP9.56□□□□□ -0.88
LIG3-207ENST00000586119 ECH1Q13011 328 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 KLRD1Q13241 179 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 PDCD1Q15116 288 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 FAHD1Q6P587 224 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 FAM216BQ8N7L0 139 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 PNLDC1Q8NA58 520 aaKnown RBP9.56□□□□□ -0.88
LIG3-207ENST00000586119 ZNF511Q8NB15 262 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 OR5T2Q8NGG2 359 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 OR56B2PQ8NGI1 322 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 UBE2FQ969M7 185 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 TCF7L1Q9HCS4 588 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 C8orf4Q9NR00 106 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 SIRT7Q9NRC8 400 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 IL20Q9NYY1 176 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 ENOPH1Q9UHY7 261 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 RPUSD1Q9UJJ7 312 aaKnown RBP9.56□□□□□ -0.88
LIG3-207ENST00000586119 BAIAP2Q9UQB8 552 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 CDH10Q9Y6N8 788 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 PLXNB1O43157 2135 aa9.56□□□□□ -0.88
LIG3-207ENST00000586119 TET2Q6N021 2002 aaPredicted RBP9.56□□□□□ -0.88
LIG3-207ENST00000586119 ZNF816-ZNF321PA0A0X1KG74 233 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 SLC22A31A6NKX4 558 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.55□□□□□ -0.88
LIG3-207ENST00000586119 IDH3BO43837 385 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 BAG2O95816 211 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 PRB2P02812 416 aaPredicted RBP9.55□□□□□ -0.88
LIG3-207ENST00000586119 ZNF823P16415 610 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 NOS3P29474 1203 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 OTX1P32242 354 aaPredicted RBP9.55□□□□□ -0.88
LIG3-207ENST00000586119 GMFBP60983 142 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 CSNK2BP67870 215 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 RCN1Q15293 331 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 WDR38Q5JTN6 314 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 TEX36Q5VZQ5 186 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 DCXRQ7Z4W1 244 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 LDLRAD3Q86YD5 345 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 LY6G5BQ8NDX9 201 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 OR52L1Q8NGH7 329 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 OR9Q1Q8NGQ5 310 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 LRRC29Q8WV35 223 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 SPTSSAQ969W0 71 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 NIPSNAP1Q9BPW8 284 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 C9orf16Q9BUW7 83 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 CENPMQ9NSP4 180 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms