RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 AP3S2P59780 193 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 PPP1CBP62140 327 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 SCN1BQ07699 218 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ARL6IP1Q15041 203 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 SLC25A35Q3KQZ1 300 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 C3orf36Q3SXR2 165 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 TMEM69Q5SWH9 247 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 HACD4Q5VWC8 232 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 PYHIN1Q6K0P9 492 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ALKBH2Q6NS38 261 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 CNIH2Q6PI25 160 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 TMEM108Q6UXF1 575 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 LRRTM1Q86UE6 522 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 CCDC190Q86UF4 302 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ZDHHC23Q8IYP9 409 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 FAM169BQ8N8A8 192 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 MINDY2Q8NBR6 621 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 NAXEQ8NCW5 288 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 CPEB3Q8NE35 698 aaKnown RBP5.37□□□□□ -1.55
LIG3-206ENST00000586058 DNAAF1Q8NEP3 725 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 OR1J1Q8NGS3 322 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 OR14K1Q8NGZ2 314 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 OR8S1Q8NH09 359 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 SYNPRQ8TBG9 265 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 PIGCQ92535 297 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 PPP1R14AQ96A00 147 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ORAI1Q96D31 301 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 POM121L2Q96KW2 1035 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ACTR6Q9GZN1 396 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 OR51B6Q9H340 312 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ELL3Q9HB65 397 aaPredicted RBP5.37□□□□□ -1.55
LIG3-206ENST00000586058 ABCB10Q9NRK6 738 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 RHBDL2Q9NX52 303 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 B3GNT2Q9NY97 397 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ZNF224Q9NZL3 707 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 GHRLQ9UBU3 117 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 Q9UFV3 132 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 MRPS28Q9Y2Q9 187 aaKnown RBP5.37□□□□□ -1.55
LIG3-206ENST00000586058 MEMO1Q9Y316 297 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 PMF1-BGLAPU3KQ54 211 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 SHANK1Q9Y566 2161 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 APC2O95996 2303 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 HCFC1P51610 2035 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 CHD3Q12873 2000 aaKnown RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 PTPRQQ9UMZ3 2332 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 LOC100509620A0A075B734 347 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 A0A0A6YYH2 397 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 A0A0G2JK05 382 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 A0A1B0GTI1 187 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 FAM230AA0A1W2PPH8 454 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 SHISA3A0PJX4 238 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 A6NJ64 397 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 J3QRK9 145 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 PIN1P1O15428 100 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 SMPD2O60906 423 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 ZNF780AO75290 641 aaPredicted RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 UPK1BO75841 260 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 TOXO94900 526 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 ALX3O95076 343 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 CGAP01215 116 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 IGKV3-15P01624 115 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 IGLV3-1P01715 115 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 EIF4EP06730 217 aaKnown RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 FAM157BP0CG42 384 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 CCL2P13500 99 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 IGFBP3P17936 291 aaPredicted RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 ELK1P19419 428 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 RAB6AP20340 208 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 CFPP27918 469 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 FAUP35544 74 aaKnown RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 MAGEB1P43366 347 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 FUT6P51993 359 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 MTCP1P56278 107 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 MRPS15P82914 257 aaKnown RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 FAM3AP98173 230 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 ZNF92Q03936 586 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 P2RY14Q15391 338 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 OR8B8Q15620 311 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 TRIM16LQ309B1 348 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 KRTAP27-1Q3LI81 207 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 ZNF718Q3SXZ3 478 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 ZNF57Q68EA5 555 aaPredicted RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 RAB12Q6IQ22 244 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 RGS7BPQ6MZT1 257 aaPredicted RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 MZT2BQ6NZ67 158 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 FIP1L1Q6UN15 594 aaKnown RBP5.36□□□□□ -1.55
LIG3-206ENST00000586058 SEM1Q6ZVN7 128 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 MOB3CQ70IA8 216 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 PRSS45Q7RTY3 260 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 OR2W3Q7Z3T1 314 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 NAA40Q86UY6 237 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 Q8N402 240 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 RPRMLQ8N4K4 120 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 OR56B2PQ8NGI1 322 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 OR51A2Q8NGJ7 313 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 KCNG3Q8TAE7 436 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 FGFBP3Q8TAT2 258 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 NPRL2Q8WTW4 380 aa5.36□□□□□ -1.55
LIG3-206ENST00000586058 CA5BP1Q8WTZ4 195 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms