RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 SMARCD3Q6STE5 483 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 WDR82Q6UXN9 313 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 DAZ4Q86SG3 579 aaKnown RBP1.61□□□□□ -2.15
SKA2-210ENST00000584089 ORMDL3Q8N138 153 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 GABRG1Q8N1C3 465 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 SLC25A29Q8N8R3 303 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 PDCD1LG2Q9BQ51 273 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 FAM192AQ9GZU8 254 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 DAZ1Q9NQZ3 744 aaKnown RBP1.61□□□□□ -2.15
SKA2-210ENST00000584089 PTTG3PQ9NZH4 202 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 RPRD2Q5VT52 1461 aaKnown RBP1.61□□□□□ -2.15
SKA2-210ENST00000584089 C2orf16Q68DN1 1984 aa1.61□□□□□ -2.15
SKA2-210ENST00000584089 NACADO15069 1562 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 KCNE1BA0A087WTH5 132 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 A0A0A6YYD5 115 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 ISPDA4D126 451 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 ZNF878C9JN71 531 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 ERI3O43414 337 aaKnown RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 FSTL3O95633 263 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 TRBV12-3P01733 135 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 MAS1P04201 325 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 ERCC1P07992 297 aaPredicted RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 MERTKQ12866 999 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 TRMT5Q32P41 509 aaKnown RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 TWF2Q6IBS0 349 aaKnown RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 APOBEC3HQ6NTF7 200 aaKnown RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 RWDD4Q6NW29 188 aaKnown RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 METAP1DQ6UB28 335 aaPredicted RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 SSX9Q7RTT3 188 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 LUZP2Q86TE4 346 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 VKORC1L1Q8N0U8 176 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 OR56A4Q8NGH8 313 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 OR5AR1Q8NGP9 310 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 DYNLL2Q96FJ2 89 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 SFXN3Q9BWM7 321 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 GEMIN7Q9H840 131 aaKnown RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 TRIM45Q9H8W5 580 aaPredicted RBP1.6□□□□□ -2.15
SKA2-210ENST00000584089 NMRK1Q9NWW6 199 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 RWDD2AQ9UIY3 292 aa1.6□□□□□ -2.15
SKA2-210ENST00000584089 BRCA1P38398 1863 aaKnown RBP1.59□□□□□ -2.15
SKA2-210ENST00000584089 MYO16Q9Y6X6 1858 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 CCL15-CCL14A0A0B4J2E2 113 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 CCDC169A6NNP5 214 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 CLDN34H7C241 214 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 CACNG3O60359 315 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 HLA-HP01893 362 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 MMP7P09237 267 aaPredicted RBP1.59□□□□□ -2.15
SKA2-210ENST00000584089 TCP1P17987 556 aaKnown RBP1.59□□□□□ -2.15
SKA2-210ENST00000584089 TGM4P49221 684 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 SERPINB8P50452 374 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 AP1S2P56377 157 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 CCL15Q16663 113 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 HADHQ16836 314 aaKnown RBP1.59□□□□□ -2.15
SKA2-210ENST00000584089 TMEM220Q6QAJ8 160 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 OR4M2Q8NGB6 313 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 TSEN15Q8WW01 171 aaKnown RBP1.59□□□□□ -2.15
SKA2-210ENST00000584089 N4BP2L2Q92802 583 aaPredicted RBP1.59□□□□□ -2.15
SKA2-210ENST00000584089 RAB1CQ92928 201 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 PANX1Q96RD7 426 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 PKMYT1Q99640 499 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 C20orf96Q9NUD7 363 aaPredicted RBP1.59□□□□□ -2.15
SKA2-210ENST00000584089 RBFOX1Q9NWB1 397 aaKnown RBP1.59□□□□□ -2.15
SKA2-210ENST00000584089 GCNT4Q9P109 453 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 ZNF492Q9P255 531 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 R4GN34 69 aa1.59□□□□□ -2.15
SKA2-210ENST00000584089 SIGLEC1Q9BZZ2 1709 aa1.59□□□□□ -2.16
SKA2-210ENST00000584089 ZBED9Q6R2W3 1325 aa1.59□□□□□ -2.16
SKA2-210ENST00000584089 J3QRE1 110 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 PSPHP1O15172 72 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 ERLIN1O75477 346 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 OXTP01178 125 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 IGHV1-46P01743 117 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 GABRG2P18507 467 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 CALRP27797 417 aaKnown RBP1.58□□□□□ -2.16
SKA2-210ENST00000584089 ERFP50548 548 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 PPP1CAP62136 330 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 MEF2CQ06413 473 aaPredicted RBP1.58□□□□□ -2.16
SKA2-210ENST00000584089 TNFRSF9Q07011 255 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 TFDP2Q14188 446 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 C6orf99Q4VX62 202 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 CCDC183Q5T5S1 534 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 MORN3Q6PF18 240 aaPredicted RBP1.58□□□□□ -2.16
SKA2-210ENST00000584089 BZW1Q7L1Q6 419 aaKnown RBP1.58□□□□□ -2.16
SKA2-210ENST00000584089 BBS7Q8IWZ6 715 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 PQLC3Q8N755 202 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 LINC00469Q8N7U9 141 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 OR52E5Q8NH55 327 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 OR51F2Q8NH61 342 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 PHOSPHO2Q8TCD6 241 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 S100PBPQ96BU1 408 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 ZNF302Q9NR11 478 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 TREX1Q9NSU2 369 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 ZNF257Q9Y2Q1 563 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 INSRP06213 1382 aa1.58□□□□□ -2.16
SKA2-210ENST00000584089 BCKDKO14874 412 aa1.57□□□□□ -2.16
SKA2-210ENST00000584089 CTNSO60931 367 aa1.57□□□□□ -2.16
SKA2-210ENST00000584089 DEDDO75618 318 aa1.57□□□□□ -2.16
SKA2-210ENST00000584089 TGFBR2P37173 567 aa1.57□□□□□ -2.16
SKA2-210ENST00000584089 NBL1P41271 181 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms