RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 AUP1Q9Y679 476 aa17.07■□□□□ 0.32
SS18-224ENST00000584083 ANXA2P2A6NMY6 339 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 ZNF254O75437 659 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 RIDAP52758 137 aaKnown RBP17.06■□□□□ 0.32
SS18-224ENST00000584083 SLC35F2Q8IXU6 374 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 ZNF679Q8IYX0 411 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 FAM81AQ8TBF8 368 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 LYZL4Q96KX0 146 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 OR8B4Q96RC9 309 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 PKP2Q99959 881 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 MICU1Q9BPX6 476 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 RBM4BQ9BQ04 359 aaKnown RBP17.06■□□□□ 0.32
SS18-224ENST00000584083 OSBPL10Q9BXB5 764 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 CLN8Q9UBY8 286 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 ZNF391Q9UJN7 358 aa17.06■□□□□ 0.32
SS18-224ENST00000584083 A0A0A6YYJ9 748 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 TRAV38-1A0A0B4J264 116 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 ACOD1A6NK06 481 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 EBAG9O00559 213 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 ACKR3P25106 362 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 IL5RAQ01344 420 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 ROM1Q03395 351 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 PRDX4Q13162 271 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 ARMCX4Q5H9R4 360 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 ZFP1Q6P2D0 407 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 BTNL3Q6UXE8 466 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 WDR86Q86TI4 376 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 COMMD2Q86X83 199 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 OR1M1Q8NGA1 313 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 PIGCQ92535 297 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 GABARAPL3Q9BY60 117 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 ADGRL4Q9HBW9 690 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 TRIM36Q9NQ86 728 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 FAM206AQ9NX38 181 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 MPC1Q9Y5U8 109 aa17.05■□□□□ 0.32
SS18-224ENST00000584083 OOEPA6NGQ2 149 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 ZNF850A8MQ14 1090 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 PRR32B1ATL7 298 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 ZNF670-ZNF695F2Z2N8 137 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 DCTDP32321 178 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 MAP2K3P46734 347 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 CXCR4P61073 352 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 CSNK2BP67870 215 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 ZNF829Q3KNS6 432 aaPredicted RBP17.04■□□□□ 0.32
SS18-224ENST00000584083 WDR25Q64LD2 544 aaPredicted RBP17.04■□□□□ 0.32
SS18-224ENST00000584083 ZNF322Q6U7Q0 402 aaPredicted RBP17.04■□□□□ 0.32
SS18-224ENST00000584083 GALNT4Q8N4A0 578 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 BPIFB2Q8N4F0 458 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 GCSAMQ8N6F7 178 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 LRRC29Q8WV35 223 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 RAB40AQ8WXH6 277 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 TECTBQ96PL2 329 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 MNTQ99583 582 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 APOL4Q9BPW4 351 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 RTL8AQ9BWD3 113 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 PBOV1Q9GZY1 135 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 ABCB9Q9NP78 766 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 GTF2A1LQ9UNN4 478 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 ORC6Q9Y5N6 252 aa17.04■□□□□ 0.32
SS18-224ENST00000584083 IGHV2-70DA0A0C4DH43 119 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 A0A0U1RQV5 110 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 PHYHO14832 338 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 ADAM20O43506 726 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 VENTXO95231 258 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 CST4P01036 141 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 FSHBP01225 129 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 FPR2P25090 351 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 PSMB10P40306 273 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 KCTD8Q6ZWB6 473 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 C11orf53Q8IXP5 236 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 C10orf67Q8IYJ2 551 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 OR51G2Q8NGK0 314 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 C22orf15Q8WYQ4 148 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 ITPKCQ96DU7 683 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 HIST1H2AAQ96QV6 131 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 RNPEPL1Q9HAU8 725 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 CLN6Q9NWW5 311 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 HAO2Q9NYQ3 351 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 ERVK-18Q9QC07 812 aa17.03■□□□□ 0.32
SS18-224ENST00000584083 WARS2Q9UGM6 360 aaKnown RBP17.03■□□□□ 0.32
SS18-224ENST00000584083 IGHV3OR15-7A0A075B7D8 119 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 H3BNX3 289 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 MAGEB4O15481 346 aaPredicted RBP17.02■□□□□ 0.32
SS18-224ENST00000584083 NDUFA2O43678 99 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 LHBP01229 141 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 GYPAP02724 150 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 EGR1P18146 543 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 PAX2Q02962 417 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 PAX8Q06710 450 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 POU4F2Q12837 409 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 ZDHHC23Q8IYP9 409 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 OR8J1Q8NGP2 316 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 OR51E1Q8TCB6 317 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 OR5P3Q8WZ94 311 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 RNF170Q96K19 258 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 FAM71F1Q96KD3 344 aaPredicted RBP17.02■□□□□ 0.32
SS18-224ENST00000584083 SLC6A7Q99884 636 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 SUCNR1Q9BXA5 334 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 GPR84Q9NQS5 396 aa17.02■□□□□ 0.32
SS18-224ENST00000584083 DNHD1Q96M86 4753 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms