RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 OR2T4Q8NH00 348 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 PAQR8Q8TEZ7 354 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 MITD1Q8WV92 249 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 TCTEX1D2Q8WW35 142 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 HTR3CQ8WXA8 447 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 HGDQ93099 445 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 ERMAPQ96PL5 475 aaPredicted RBP3.94□□□□□ -1.78
SS18-223ENST00000583595 TBX15Q96SF7 602 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 EPYCQ99645 322 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 ATP5SQ99766 215 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 RBM4BQ9BQ04 359 aaKnown RBP3.94□□□□□ -1.78
SS18-223ENST00000583595 MARVELD1Q9BSK0 173 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 BBS2Q9BXC9 721 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 ACTR6Q9GZN1 396 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 IL22Q9GZX6 179 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 PARLQ9H300 379 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 NUDT15Q9NV35 164 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 C14orf105Q9NVL8 296 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 EHFQ9NZC4 300 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 PRODH2Q9UF12 536 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 C3orf18Q9UK00 162 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 KCNIP3Q9Y2W7 256 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 POLR3HQ9Y535 204 aaPredicted RBP3.94□□□□□ -1.78
SS18-223ENST00000583595 ORC6Q9Y5N6 252 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 MMP24Q9Y5R2 645 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 DLEC1Q9Y238 1755 aa3.94□□□□□ -1.78
SS18-223ENST00000583595 BTAF1O14981 1849 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 SBF2Q86WG5 1849 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 PLIN4Q96Q06 1357 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 A0A087X002 238 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 LOC100130705A0A1B0GUX0 176 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 A0A1W2PP18 115 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 D6RAR5 112 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 E9PLD3 99 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 E9PQ18 207 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 SMLR1H3BR10 107 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 M0R233 179 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 SULT2B1O00204 365 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 DFFAO00273 331 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 PRMT5O14744 637 aaPredicted RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 RAB29O14966 203 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 TPST1O60507 370 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 SCRG1O75711 98 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 GADD45GO95257 159 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 NSA2O95478 260 aaKnown RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 HLA-DQB1P01920 261 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 APOC3P02656 99 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 SERPINA5P05154 406 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 RNH1P13489 461 aaKnown RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 DPEP1P16444 411 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 COX5AP20674 150 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 BCL3P20749 454 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 ZNF10P21506 573 aaPredicted RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 BCKDHBP21953 392 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 CCR7P32248 378 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 CRATP43155 626 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 KIR3DL2P43630 455 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 OR1D4P47884 311 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 KCNJ3P48549 501 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 RGS6P49758 472 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 GNG10P50151 68 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 XKP51811 444 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 DLX5P56178 289 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 SRPXP78539 464 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 ZFP36L1Q07352 338 aaKnown RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 CARD16Q5EG05 197 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 VWA2Q5GFL6 755 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 COQ5Q5HYK3 327 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 ZNF470Q6ECI4 717 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 C22orf42Q6IC83 251 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 REEP3Q6NUK4 255 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 TBPL2Q6SJ96 375 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 NPSR1Q6W5P4 371 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 Q6ZSR3 168 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 TPGS1Q6ZTW0 290 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 ZFAND4Q86XD8 727 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 RIMKLAQ8IXN7 391 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 FAM71AQ8IYT1 594 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 ENTHD1Q8IYW4 607 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 TRAM1L1Q8N609 369 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 OR2L5Q8NG80 312 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 LKAAEAR1Q8TD35 194 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 DTD1Q8TEA8 209 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 OR1E3Q8WZA6 343 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 RAB1CQ92928 201 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 POP5Q969H6 163 aaKnown RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 CREB3L1Q96BA8 519 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 MRPS24Q96EL2 167 aaKnown RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 ZBED6CLQ96FA7 236 aaPredicted RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 C14orf144Q96I85 54 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 COL21A1Q96P44 957 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 MCCC1Q96RQ3 725 aaPredicted RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 TMEM175Q9BSA9 504 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 OPN3Q9H1Y3 402 aaPredicted RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 MED28Q9H204 178 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 WDR55Q9H6Y2 383 aaPredicted RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 SPACA1Q9HBV2 294 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 MRPL47Q9HD33 250 aaKnown RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 C6orf50Q9HD87 102 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 ZDHHC4Q9NPG8 344 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms