RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 OR52P1PQ8NH57 321 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 OR1S1Q8NH92 325 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 MITD1Q8WV92 249 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 RTN4IP1Q8WWV3 396 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 DEDD2Q8WXF8 326 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 ESR2Q92731 530 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 CDS1Q92903 461 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 CIDECQ96AQ7 238 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 RBMXL1Q96E39 390 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 KCNS1Q96KK3 526 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 RDH12Q96NR8 316 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 LZTFL1Q9NQ48 299 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 PRSS16Q9NQE7 514 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 TUBG2Q9NRH3 451 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 CES1P1Q9UKY3 287 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 DENND4AQ7Z401 1863 aa2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 TET2Q6N021 2002 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-209ENST00000583441 IGLV3-12A0A075B6K2 115 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 IGHV3-49A0A0A0MS15 119 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 CENPBD1B2RD01 187 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 MYL12BO14950 172 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 PSPHP1O15172 72 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 RBBP9O75884 186 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 ETHE1O95571 254 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 TTC4O95801 387 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 GCGP01275 180 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 MBP02144 154 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 CRYGCP07315 174 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 ZNF806P0C7X5 589 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 CFHR2P36980 270 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 PMELP40967 661 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 OR1G1P47890 313 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 CCNG1P51959 295 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 RPL18AQ02543 176 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 C2orf54Q08AI8 447 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 PRSS8Q16651 343 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 THOC7Q6I9Y2 204 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 OPN5Q6U736 354 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 UNQ9165/PRO28630Q6UXU0 137 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 DAW1Q8N136 415 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 ZNF615Q8N8J6 731 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 FBXO36Q8NEA4 188 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 OR1L1Q8NH94 360 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 CIRBP-AS1Q8TBR5 109 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 ZNF707Q96C28 371 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 SFXN3Q9BWM7 321 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 NAA50Q9GZZ1 169 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 OR2AG1Q9H205 316 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 KIR3DX1Q9H7L2 352 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 ZNF442Q9H7R0 627 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 CBY1Q9Y3M2 126 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 UBIAD1Q9Y5Z9 338 aa2.16□□□□□ -2.06
SMCHD1-209ENST00000583441 AQRO60306 1485 aaKnown RBP eCLIP2.15□□□□□ -2.065e-7■■■■□ 23.8
SMCHD1-209ENST00000583441 SBNO1A3KN83 1393 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 IGLV2-18A0A075B6J9 118 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 A0A0B4J2E0 115 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 C5orf63A6NC05 138 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 MANBAO00462 879 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 HLA-DQB1P01920 261 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF286BP0CG31 522 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 STAG3L2P0CL84 134 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 THRAP10827 490 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 IVDP26440 423 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 PSMB5P28074 263 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 POLR2IP36954 125 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 KIR3DL2P43630 455 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 PRLHRP49683 370 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 UBE2E1P51965 193 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 TAS2R60P59551 318 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 HNRNPA1L2Q32P51 320 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 STEAP4Q687X5 459 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 Q6ZSR6 202 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 HMGN2P46Q86SG4 172 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 ARHGAP18Q8N392 663 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 WDR31Q8NA23 367 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 SFXN5Q8TD22 340 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 TCP10LQ8TDR4 215 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 DCAKDQ8WVC6 231 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 FAM131CQ96AQ9 280 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 KIAA1143Q96AT1 154 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 NEURL3Q96EH8 262 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 SMARCD1Q96GM5 515 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 FAM19A4Q96LR4 140 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF717Q9BY31 904 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 GAL3ST2Q9H3Q3 398 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 FBXO44Q9H4M3 255 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 WFDC1Q9HC57 220 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 SIGLEC9Q9Y336 463 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 S4R3C0 116 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 AHDC1Q5TGY3 1603 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 MROH5Q6ZUA9 1318 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 NEURL4Q96JN8 1562 aa2.15□□□□□ -2.07
SMCHD1-209ENST00000583441 JCADQ9P266 1359 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 A0A0A6YYD5 115 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 ARPC4-TTLL3A0A0A6YYG9 625 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 GSTTP1A0A1W2PQM5 241 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 COLCA2A8K830 154 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 LINC01619G3V211 115 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 DFFAO00273 331 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 SERPINB7O75635 380 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms