RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 APCP25054 2843 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 A0A087X0T9 212 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 IGHV5-51A0A0C4DH38 117 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 C1orf232A0A0U1RR37 186 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 MGAT4DA6NG13 374 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 HACD1B0YJ81 288 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 LOC110117498-PIK3R3F6TDL0 507 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 DFFAO00273 331 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 MFSD11O43934 449 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 CDK14O94921 469 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 VAMP5O95183 116 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 SLC25A14O95258 325 aaPredicted RBP1.8□□□□□ -2.12
COPS3-217ENST00000583160 MPZL1O95297 269 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 LCA5LO95447 670 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 OPN1MWP04001 364 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 HLA-DQB2P05538 268 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 FAM228BP0C875 321 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 OPN1MW2P0DN77 364 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 OPN1MW3P0DN78 364 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 FOLR1P15328 257 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 TNNI3P19429 210 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 MMP11P24347 488 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 KDELR1P24390 212 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 CDKN2BP42772 138 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 SLC1A1P43005 524 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 PRLHRP49683 370 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 GFERP55789 205 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 MAXP61244 160 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 RPS15P62841 145 aaKnown RBP1.8□□□□□ -2.12
COPS3-217ENST00000583160 XIAPP98170 497 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 ACVR1Q04771 509 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 XRCC4Q13426 336 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 ART3Q13508 389 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 NCF4Q15080 339 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 INAQ16352 499 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 HADHQ16836 314 aaKnown RBP1.8□□□□□ -2.12
COPS3-217ENST00000583160 TPD52L1Q16890 204 aaPredicted RBP1.8□□□□□ -2.12
COPS3-217ENST00000583160 DEFB109BQ30KR1 87 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 KDELC1Q6UW63 502 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 SPNS3Q6ZMD2 512 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 FAM92BQ6ZTR7 304 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 THOC6Q86W42 341 aaKnown RBP1.8□□□□□ -2.12
COPS3-217ENST00000583160 OR2L13Q8N349 312 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 ST6GALNAC3Q8NDV1 305 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 OR2Y1Q8NGV0 311 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 CT55Q8WUE5 264 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 ACOT11Q8WXI4 607 aaPredicted RBP1.8□□□□□ -2.12
COPS3-217ENST00000583160 PEX13Q92968 403 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 NAP1L5Q96NT1 182 aaPredicted RBP1.8□□□□□ -2.12
COPS3-217ENST00000583160 FAM111AQ96PZ2 611 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 ULBP3Q9BZM4 244 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 OR52A5Q9H2C5 316 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 WDR54Q9H977 334 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 SLC17A5Q9NRA2 495 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 CTPS2Q9NRF8 586 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 ZNF355PQ9NSJ1 428 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 RBM22Q9NW64 420 aaKnown RBP eCLIP1.8□□□□□ -2.12
COPS3-217ENST00000583160 GPATCH2LQ9NWQ4 482 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 PCSK1NQ9UHG2 260 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 FARSAQ9Y285 508 aaKnown RBP1.8□□□□□ -2.12
COPS3-217ENST00000583160 AP1M2Q9Y6Q5 423 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 ADGRG4Q8IZF6 3080 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 F8P00451 2351 aa1.8□□□□□ -2.12
COPS3-217ENST00000583160 C2CD3Q4AC94 2353 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 IGHV3-66A0A0C4DH42 116 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 RNF103-CHMP3A0A140T963 221 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 A0A1B0GUH1 482 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 SLC5A10A0PJK1 596 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 OR52A4PA6NMU1 304 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 BTNL10A8MVZ5 291 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 LIN7AO14910 233 aaPredicted RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 PSTPIP1O43586 416 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 OR1F1O43749 312 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 POP7O75817 140 aaKnown RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 SRP72O76094 671 aaKnown RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 AP2A1O95782 977 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 GYPCP04921 128 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 ALDOBP05062 364 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 ERGP11308 486 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 NT5EP21589 574 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 CD34P28906 385 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 CA5AP35218 305 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 SPAM1P38567 509 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 UQCRFS1P47985 274 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 ZNF140P52738 457 aaPredicted RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 PPP1CAP62136 330 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 GBE1Q04446 702 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 TFDP2Q14188 446 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 ITIH4Q14624 930 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 TAF1AQ15573 450 aaPredicted RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 GGTA1PQ4G0N0 100 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 NADK2Q4G0N4 442 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 FILIP1LQ4L180 1135 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 COA6Q5JTJ3 125 aaKnown RBP1.79□□□□□ -2.12
COPS3-217ENST00000583160 CCDC122Q5T0U0 273 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 H3F3CQ6NXT2 135 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 TMEM220Q6QAJ8 160 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 SASS6Q6UVJ0 657 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 HSDL2Q6YN16 418 aa1.79□□□□□ -2.12
COPS3-217ENST00000583160 Q6ZPB1 254 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms