RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 HIST1H2AAQ96QV6 131 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 GAL3ST1Q99999 423 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 URM1Q9BTM9 101 aaKnown RBP8.1□□□□□ -1.11
SS18-220ENST00000582092 PCDHB16Q9NRJ7 776 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 COPZ2Q9P299 210 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 MYEF2Q9P2K5 600 aaKnown RBP8.1□□□□□ -1.11
SS18-220ENST00000582092 PRSS50Q9UI38 385 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 OSGIN2Q9Y236 505 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 V9GYS6 101 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 DNAJC13O75165 2243 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 C5orf49A4QMS7 147 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 GGT3PA6NGU5 568 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 FIGNL2A6NMB9 653 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 DHRS7CA6NNS2 312 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 PLA2G10O15496 165 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 SS18L1O75177 396 aaPredicted RBP8.09□□□□□ -1.11
SS18-220ENST00000582092 CTAG2O75638 210 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 HLA-HP01893 362 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 FAHP16930 419 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 CRYGSP22914 178 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 STOMP27105 288 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 OTX1P32242 354 aaPredicted RBP8.09□□□□□ -1.11
SS18-220ENST00000582092 PTGER4P35408 488 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 GDNFP39905 211 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 ATP1B3P54709 279 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 ACTBP60709 375 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 ACTG1P63261 375 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 DGCR2P98153 550 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 PMPCAQ10713 525 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 DYRK1AQ13627 763 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 GPR176Q14439 515 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 GSG1Q2KHT4 349 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 ZNF324BQ6AW86 544 aaPredicted RBP8.09□□□□□ -1.11
SS18-220ENST00000582092 GLIPR1L1Q6UWM5 242 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 UTS2BQ765I0 119 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 OR2W3Q7Z3T1 314 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 SIAH3Q8IW03 269 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 FTMTQ8N4E7 242 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 OR1K1Q8NGR3 316 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 UBASH3BQ8TF42 649 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 ITFG2Q969R8 447 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 APOBEC3DQ96AK3 386 aaPredicted RBP8.09□□□□□ -1.11
SS18-220ENST00000582092 SLC25A38Q96DW6 304 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 TECTBQ96PL2 329 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 TAAR6Q96RI8 345 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 CST11Q9H112 138 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 MMP28Q9H239 520 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 CNTD2Q9H8S5 307 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 CDH20Q9HBT6 801 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 MCUBQ9NWR8 336 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 NLKQ9UBE8 527 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 GHRLQ9UBU3 117 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 KCNN3Q9UGI6 736 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 PROCRQ9UNN8 238 aa8.09□□□□□ -1.11
SS18-220ENST00000582092 PRRC2CQ9Y520 2896 aaKnown RBP8.09□□□□□ -1.11
SS18-220ENST00000582092 FLNBO75369 2602 aaKnown RBP8.09□□□□□ -1.11
SS18-220ENST00000582092 UBR5O95071 2799 aaPredicted RBP8.09□□□□□ -1.11
SS18-220ENST00000582092 PTPN13Q12923 2485 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 TRGV8A0A0C4DH27 118 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 SULT1C2O00338 296 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 WDR1O75083 606 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CRTAPO75718 401 aaPredicted RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 KDM4BO94953 1096 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 ALX3O95076 343 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CNOT4O95628 575 aaKnown RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 NRASP01111 189 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 IL2RAP01589 272 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CSTBP04080 98 aaKnown RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 TPOP07202 933 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CHRM2P08172 466 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 HOXD4P09016 255 aaPredicted RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 CSF1P09603 554 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 TMEM225BP0DP42 221 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 HOXB1P14653 301 aaPredicted RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 SRP9P49458 86 aaKnown RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 TDGF1P3P51864 188 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 MTCP1P56278 107 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 SSBP1Q04837 148 aaKnown RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 TBC1D28Q2M2D7 210 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 SNAI3Q3KNW1 292 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CLVS2Q5SYC1 327 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 SFRP5Q5T4F7 317 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 UNQ6126/PRO20091Q6UXV3 157 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 MOB3CQ70IA8 216 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 AKAP14Q86UN6 197 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 GCNT2Q8N0V5 402 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CELF2-AS1Q8N7Q2 184 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 DUSP18Q8NEJ0 188 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 OR6K3Q8NGY3 331 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 OR52I2Q8NH67 350 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 OR2AE1Q8NHA4 323 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 NPRL2Q8WTW4 380 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 TNFAIP8L1Q8WVP5 186 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 PIGCQ92535 297 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 HPS1Q92902 700 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 YIPF5Q969M3 257 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 SLC25A28Q96A46 364 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 BORCS8Q96FH0 119 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 ZC3HAV1LQ96H79 300 aaKnown RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 LYZL4Q96KX0 146 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms